SMTL ID : 1w3c.1 (1 other biounit)

Crystal structure of the Hepatitis C Virus NS3 Protease in complex with a peptidomimetic inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

1 x DN1: 3-({(2S)-2-[({(1R)-1-[({(1R)-1-[(R)-CARBOXY(HYDROXY)METHYL]-3,3-DIFLUOROPROPYL}AMINO)CARBONYL]-3-METHYLBUTYL}AMINO)CARB ONYL]-2,3-DIHYDRO-1H-INDOL-2-YL}METHYL)THIOPHENE-2-CARBOXYLIC ACID(Covalent)

DN1.1: 11 residues within 4Å: Chain A: H.57, V.132, K.136, G.137, S.138, S.139, F.154, R.155, A.156, A.157, C.159 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:K.136, A:A.156 Hydrogen bonds: A:K.136, A:G.137, A:S.139, A:R.155, A:A.157, A:A.157 Salt bridges: A:K.136

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ontoria, J.M. et al., The Design and Enzyme-Bound Crystal Structure of Indoline Based Peptidomimetic Inhibitors of Hepatitis C Virus Ns3 Protease. J.Med.Chem. (2004)

Release Date

2004-12-09

Peptides

PROTEASE/HELICASE NS3 (P70): A
NONSTRUCTURAL PROTEIN NS4A (P4): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

PROTEASE/HELICASE NS3 (P70)

NONSTRUCTURAL PROTEIN NS4A (P4)

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