SMTL ID : 1wkh.1

Acetylornithine aminotransferase from thermus thermophilus HB8

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-dimer

Ligands

2 x PPE: 4-[(1,3-DICARBOXY-PROPYLAMINO)-METHYL]-3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDINIUM(Non-covalent)

PPE.1: 17 residues within 4Å: Chain A: Y.54, S.112, G.113, T.114, N.117, F.140, S.141, G.142, E.192, E.197, D.225, I.227, Q.228, K.254, R.371 Chain B: T.282, T.283 21 PLIP interactions: 16 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:Y.54, A:F.140, A:E.192 Hydrogen bonds: A:S.112, A:G.113, A:T.114, A:N.117, A:E.197, A:K.254, A:K.254, B:T.282, B:T.283, B:T.283, B:T.283 Water bridges: A:S.112, A:S.112, A:E.192, A:E.197, B:F.284 Salt bridges: A:K.254, A:R.371 PPE.2: 16 residues within 4Å: Chain A: T.282, T.283 Chain B: S.112, G.113, T.114, N.117, F.140, S.141, G.142, E.192, E.197, D.225, I.227, Q.228, K.254, R.371 21 PLIP interactions: 16 interactions with chain B, 5 interactions with chain A Hydrophobic interactions: B:E.192 Hydrogen bonds: B:S.112, B:G.113, B:T.114, B:N.117, B:E.197, B:E.197, B:E.197, B:Q.228, B:K.254, A:T.283, A:T.283 Water bridges: B:S.112, B:R.143, B:E.192, A:T.282, A:T.282, A:F.284 Salt bridges: B:K.254, B:R.371 pi-Stacking: B:F.140

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matsumura, M. et al., Acetylornithine aminotransferase from thermus thermophilus HB8. To be Published

Release Date

2005-09-27

Peptides

Acetylornithine/acetyl-lysine aminotransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Acetylornithine/acetyl-lysine aminotransferase

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