SMTL ID : 1wom.1 (1 other biounit)

Crystal structure of RsbQ

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x MLA: MALONIC ACID(Non-covalent)

MLA.1: 2 residues within 4Å: Chain A: H.117, H.270 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:H.117, A:H.270

9 x PGO: S-1,2-PROPANEDIOL(Non-covalent)

PGO.2: 7 residues within 4Å: Chain A: G.28, F.29, H.97, S.98, V.99, V.165, H.249 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.165 Hydrogen bonds: A:F.29, A:S.98, A:V.99 PGO.3: 4 residues within 4Å: Chain A: H.3, S.6, I.7, R.10 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.7 Water bridges: A:R.10 PGO.4: 7 residues within 4Å: Chain A: S.34, V.35, A.38, I.174, E.177, R.181, M.253 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.38, A:M.253 PGO.5: 3 residues within 4Å: Chain A: R.203, E.204, Y.231 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:R.203 Hydrogen bonds: A:E.204 PGO.6: 4 residues within 4Å: Chain A: S.18, G.19, E.45, D.46 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.46 PGO.7: 8 residues within 4Å: Chain A: G.30, C.31, Y.54, V.55, G.56, S.57, T.185, F.193 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.54 Hydrogen bonds: A:G.30, A:G.30, A:C.31, A:T.185 PGO.8: 6 residues within 4Å: Chain A: E.91, P.112, E.113, F.115, S.116, V.211 No protein-ligand interaction detected (PLIP) PGO.9: 5 residues within 4Å: Chain A: A.21, V.93, L.267, H.270, V.271 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.267 PGO.10: 3 residues within 4Å: Chain A: E.148, M.149, K.152 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:E.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kaneko, T. et al., Crystal structures of RsbQ, a stress-response regulator in Bacillus subtilis. Protein Sci. (2005)

Release Date

2005-02-01

Peptides

Sigma factor sigB regulation protein rsbQ: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Sigma factor sigB regulation protein rsbQ

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