SMTL ID : 1wth.1

Crystal structure of gp5-S351L mutant and gp27 complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-3-3-mer

Ligands

3 x K: POTASSIUM ION(Non-covalent)

K.1: 5 residues within 4Å: Chain A: E.552 Chain C: E.552 Chain E: E.552 Ligands: K.3, K.5 No protein-ligand interaction detected (PLIP) K.3: 5 residues within 4Å: Chain A: E.552 Chain C: E.552 Chain E: E.552 Ligands: K.1, K.5 No protein-ligand interaction detected (PLIP) K.5: 5 residues within 4Å: Chain A: E.552 Chain C: E.552 Chain E: E.552 Ligands: K.1, K.3 No protein-ligand interaction detected (PLIP)

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 6 residues within 4Å: Chain A: K.454 Chain C: K.454, Y.464 Chain E: K.454 Ligands: PO4.4, PO4.6 8 PLIP interactions: 2 interactions with chain C, 4 interactions with chain A, 2 interactions with chain E Water bridges: C:Y.464, A:K.454, A:Y.464, A:Y.464, E:Y.464 Salt bridges: C:K.454, A:K.454, E:K.454 PO4.4: 6 residues within 4Å: Chain A: K.454 Chain C: K.454 Chain E: K.454, Y.464 Ligands: PO4.2, PO4.6 8 PLIP interactions: 3 interactions with chain C, 3 interactions with chain A, 2 interactions with chain E Water bridges: C:K.454, C:Y.464, A:K.454, A:Y.464, E:Y.464 Salt bridges: C:K.454, A:K.454, E:K.454 PO4.6: 6 residues within 4Å: Chain A: K.454, Y.464 Chain C: K.454 Chain E: K.454 Ligands: PO4.2, PO4.4 8 PLIP interactions: 3 interactions with chain C, 2 interactions with chain A, 3 interactions with chain E Water bridges: C:K.454, C:Y.464, A:Y.464, E:K.454, E:Y.464 Salt bridges: C:K.454, A:K.454, E:K.454

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kanamaru, S. et al., Control of bacteriophage t4 tail lysozyme activity during the infection process. J.Mol.Biol. (2005)

Release Date

2005-03-08

Peptides

Tail-associated lysozyme: ACE
Baseplate structural protein Gp27: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

E
A

B
D

D
D

F
D

Tail-associated lysozyme

Baseplate structural protein Gp27

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