SMTL ID : 1xdd.1 (1 other biounit)

X-ray structure of LFA-1 I-domain in complex with LFA703 at 2.2A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: S.16, S.18, D.116 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:S.16, A:S.18, A:D.116, H2O.1, H2O.1, H2O.1

1 x AAY: 8-[2-((2S)-4-HYDROXY-1-{[5-(HYDROXYMETHYL)-6-METHOXY-2-NAPHTHYL]METHYL}-6-OXOPIPERIDIN-2-YL)ETHYL]-3,7-DIMETHYL-1,2,3,7,8,8A-HEXAHYDRONAPHTHALEN-1-YL 2-METHYLBUTANOATE(Non-covalent)

AAY.2: 15 residues within 4Å: Chain A: G.5, V.7, L.9, Y.43, T.108, I.112, I.132, Y.134, E.161, K.164, L.175, E.178, L.179, K.182, I.183 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:V.7, A:L.9, A:Y.43, A:T.108, A:I.112, A:I.132, A:Y.134, A:Y.134, A:L.175, A:E.178, A:L.179, A:K.182, A:I.183 Hydrogen bonds: A:G.5, A:G.5, A:Y.134 Water bridges: A:K.164 Salt bridges: A:K.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weitz-Schmidt, G. et al., Improved lymphocyte function-associated antigen-1 (LFA-1) inhibition by statin derivatives: molecular basis determined by x-ray analysis and monitoring of LFA-1 conformational changes in vitro and ex vivo. J.Biol.Chem. (2004)

Release Date

2004-09-21

Peptides

Integrin alpha-L: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Integrin alpha-L

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