SMTL ID : 1xma.1

Structure of a transcriptional regulator from Clostridium thermocellum Cth-833

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

4 x HG: MERCURY (II) ION(Non-covalent)

HG.1: 3 residues within 4Å: Chain A: Y.118, C.122 Chain B: K.137 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:K.137 HG.2: 3 residues within 4Å: Chain A: C.122, E.123, E.126 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.122 HG.7: 2 residues within 4Å: Chain B: E.52, K.67 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:E.52 HG.8: 1 residues within 4Å: Chain B: V.32 No protein-ligand interaction detected (PLIP)

13 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.3: 5 residues within 4Å: Chain A: L.49, S.55, I.60, N.63 Ligands: UNX.4 No protein-ligand interaction detected (PLIP) UNX.4: 5 residues within 4Å: Chain A: L.49, G.53 Ligands: UNX.3, UNX.5, UNX.6 No protein-ligand interaction detected (PLIP) UNX.5: 5 residues within 4Å: Chain A: G.53, D.54, S.55, E.59 Ligands: UNX.4 No protein-ligand interaction detected (PLIP) UNX.6: 2 residues within 4Å: Chain A: E.52 Ligands: UNX.4 No protein-ligand interaction detected (PLIP) UNX.9: 4 residues within 4Å: Chain B: I.33, L.71 Ligands: UNX.10, UNX.16 No protein-ligand interaction detected (PLIP) UNX.10: 4 residues within 4Å: Chain B: L.71, Y.72, V.73 Ligands: UNX.9 No protein-ligand interaction detected (PLIP) UNX.11: 3 residues within 4Å: Chain B: I.66, D.69 Ligands: UNX.12 No protein-ligand interaction detected (PLIP) UNX.12: 3 residues within 4Å: Chain B: I.66, E.70 Ligands: UNX.11 No protein-ligand interaction detected (PLIP) UNX.13: 5 residues within 4Å: Chain B: Y.56, G.57, T.106, Y.108 Ligands: UNX.14 No protein-ligand interaction detected (PLIP) UNX.14: 4 residues within 4Å: Chain B: Y.80, F.83, Y.108 Ligands: UNX.13 No protein-ligand interaction detected (PLIP) UNX.15: 4 residues within 4Å: Chain B: L.49, G.53, S.55 Ligands: UNX.17 No protein-ligand interaction detected (PLIP) UNX.16: 3 residues within 4Å: Chain B: V.32, I.33 Ligands: UNX.9 No protein-ligand interaction detected (PLIP) UNX.17: 5 residues within 4Å: Chain B: G.53, D.54, S.55, E.59 Ligands: UNX.15 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, H. et al., Structure of a transcriptional regulator from Clostridium thermocellum Cth-833. To be published

Release Date

2004-12-14

Peptides

Predicted transcriptional regulator: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Predicted transcriptional regulator