SMTL ID : 1xqw.1

Crystal structure of F1-mutant S105A complex with PHE-LEU

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x PHE: PHENYLALANINE(Non-covalent)

PHE.1: 12 residues within 4Å: Chain A: G.36, G.37, A.105, Y.106, L.131, V.134, T.137, N.209, E.213, I.216, I.220 Ligands: LEU.2 11 PLIP interactions: 10 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:L.131, A:V.134, A:V.134, A:T.137, A:I.216, A:I.220 Hydrogen bonds: A:G.37, A:G.37, A:Y.106, L.2 Water bridges: A:N.209 PHE.3: 8 residues within 4Å: Chain A: M.40, Q.171, V.174, Y.178, L.196, Y.205, P.211 Ligands: LEU.4 4 PLIP interactions: 1 Ligand-Ligand interactions, 3 interactions with chain A Hydrophobic interactions: L.4, A:V.174, A:Y.178 Hydrogen bonds: A:Y.205

2 x LEU: LEUCINE(Non-covalent)

LEU.2: 12 residues within 4Å: Chain A: G.36, G.37, M.40, Y.44, S.104, A.105, L.196, E.213, E.245, H.271, L.272 Ligands: PHE.1 7 PLIP interactions: 6 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:L.196 Hydrogen bonds: A:G.36, A:G.37, A:Y.44, A:E.213, F.1 Salt bridges: A:H.271 LEU.4: 4 residues within 4Å: Chain A: Q.171, Y.178, L.196 Ligands: PHE.3 2 PLIP interactions: 2 Ligand-Ligand interactions Hydrophobic interactions: F.3 Hydrogen bonds: L.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Goettig, P. et al., X-ray snapshots of peptide processing in mutants of tricorn-interacting factor F1 from Thermoplasma acidophilum. J.Biol.Chem. (2005)

Release Date

2005-07-12

Peptides

Proline iminopeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Proline iminopeptidase

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