SMTL ID : 1xu4.1

ATPASE IN COMPLEX WITH AMP-PNP, MAGNESIUM AND POTASSIUM CO-F

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: T.112 Ligands: K.4, ANP.5 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.112, H2O.1, H2O.1, H2O.1 MG.2: 3 residues within 4Å: Chain A: Q.98, S.99, D.246 6 PLIP interactions: 2 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:Q.98, A:D.246, H2O.1, H2O.1, H2O.1, H2O.1

2 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)

K.3: 1 residues within 4Å: Ligands: ANP.5 No protein-ligand interaction detected (PLIP) K.4: 3 residues within 4Å: Chain A: E.151 Ligands: MG.1, ANP.5 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.151

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.5: 16 residues within 4Å: Chain A: F.107, G.108, S.109, G.110, K.111, T.112, Q.113, E.151, R.158, Q.161, I.315, T.316, E.317 Ligands: MG.1, K.3, K.4 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:G.108, A:S.109, A:G.110, A:K.111, A:K.111, A:K.111, A:T.112, A:Q.113, A:Q.113, A:R.158, A:R.158, A:Q.161 Water bridges: A:T.112, A:T.112, A:T.112, A:Q.257, A:R.296

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, Y. et al., Crystal structure of an ATPase-active form of Rad51 homolog from Methanococcus voltae. Insights into potassium dependence. J.Biol.Chem. (2005)

Release Date

2004-11-16

Peptides

DNA repair and recombination protein radA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA repair and recombination protein radA

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