SMTL ID : 1y7o.1 (1 other biounit)

The structure of Streptococcus pneumoniae A153P ClpP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

homo-14-mer

Ligands

16 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: M.99, N.100, I.102, A.104 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:M.99, A:I.102, A:A.104 CA.2: 4 residues within 4Å: Chain B: M.99, I.102, A.104, V.106 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:M.99, B:I.102, B:A.104, H2O.3 CA.3: 4 residues within 4Å: Chain C: M.99, I.102, A.104 Chain D: S.214 4 PLIP interactions: 3 interactions with chain C, 1 interactions with chain D Metal complexes: C:M.99, C:I.102, C:A.104, D:S.214 CA.4: 1 residues within 4Å: Chain C: E.176 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:E.176 CA.5: 4 residues within 4Å: Chain E: M.99, I.102, A.104, V.106 3 PLIP interactions: 3 interactions with chain E Metal complexes: E:M.99, E:I.102, E:A.104 CA.6: 1 residues within 4Å: Chain F: D.105 2 PLIP interactions: 2 interactions with chain F Metal complexes: F:D.105, F:D.105 CA.7: 3 residues within 4Å: Chain F: M.99, I.102, A.104 4 PLIP interactions: 3 interactions with chain F, 1 Ligand-Water interactions Metal complexes: F:M.99, F:I.102, F:A.104, H2O.5 CA.8: 5 residues within 4Å: Chain G: M.99, I.102, K.103, A.104, D.105 4 PLIP interactions: 3 interactions with chain G, 1 Ligand-Water interactions Metal complexes: G:M.99, G:I.102, G:A.104, H2O.6 CA.9: 4 residues within 4Å: Chain H: M.99, N.100, I.102, A.104 3 PLIP interactions: 3 interactions with chain H Metal complexes: H:M.99, H:I.102, H:A.104 CA.10: 4 residues within 4Å: Chain I: M.99, I.102, A.104, V.106 4 PLIP interactions: 3 interactions with chain I, 1 Ligand-Water interactions Metal complexes: I:M.99, I:I.102, I:A.104, H2O.8 CA.11: 4 residues within 4Å: Chain J: M.99, I.102, A.104 Chain K: S.214 4 PLIP interactions: 3 interactions with chain J, 1 interactions with chain K Metal complexes: J:M.99, J:I.102, J:A.104, K:S.214 CA.12: 1 residues within 4Å: Chain J: E.176 1 PLIP interactions: 1 interactions with chain J Metal complexes: J:E.176 CA.13: 4 residues within 4Å: Chain L: M.99, I.102, A.104, V.106 3 PLIP interactions: 3 interactions with chain L Metal complexes: L:M.99, L:I.102, L:A.104 CA.14: 1 residues within 4Å: Chain M: D.105 2 PLIP interactions: 2 interactions with chain M Metal complexes: M:D.105, M:D.105 CA.15: 3 residues within 4Å: Chain M: M.99, I.102, A.104 4 PLIP interactions: 3 interactions with chain M, 1 Ligand-Water interactions Metal complexes: M:M.99, M:I.102, M:A.104, H2O.11 CA.16: 5 residues within 4Å: Chain N: M.99, I.102, K.103, A.104, D.105 4 PLIP interactions: 3 interactions with chain N, 1 Ligand-Water interactions Metal complexes: N:M.99, N:I.102, N:A.104, H2O.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gribun, A. et al., The ClpP double ring tetradecameric protease exhibits plastic ring-ring interactions, and the N termini of its subunits form flexible loops that are essential for ClpXP and ClpAP complex formation. J.Biol.Chem. (2005)

Release Date

2005-02-08

Peptides

ATP-dependent Clp protease proteolytic subunit: ABCDEFGHIJKLMN

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
A

I
B

J
C

K
D

L
E

M
F

N
G

ATP-dependent Clp protease proteolytic subunit

Related Entries With Identical Sequence