SMTL ID : 1ybd.2 (4 other biounits)

Crystal structure analysis of uridylate kinase from Neisseria meningitidis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-tetramer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: K.13, S.15, G.54, T.143, D.144, K.161 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:K.13, A:T.143, A:K.161 Water bridges: A:G.16, A:E.17, A:E.17, A:T.143, A:D.144 GOL.2: 6 residues within 4Å: Chain B: K.13, S.15, G.54, T.143, D.144, K.161 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:K.13, B:K.161 Water bridges: B:G.16, B:E.17, B:E.17, B:T.143, B:T.143, B:D.144 GOL.3: 6 residues within 4Å: Chain C: K.13, S.15, G.54, T.143, D.144, K.161 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:K.13, C:K.161 Water bridges: C:G.16, C:E.17, C:E.17, C:T.143, C:T.143, C:D.144 GOL.4: 6 residues within 4Å: Chain D: K.13, S.15, G.54, T.143, D.144, K.161 8 PLIP interactions: 8 interactions with chain D Hydrogen bonds: D:K.13, D:K.161 Water bridges: D:G.16, D:E.17, D:E.17, D:T.143, D:T.143, D:D.144

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumaran, D. et al., Crystal structure analysis of uridylate kinase from Neisseria meningitidis. To be Published

Release Date

2005-02-15

Peptides

Uridylate kinase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

D
B

Uridylate kinase

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