SMTL ID : 1yz9.1

Crystal structure of RNase III mutant E110Q from Aquifex aeolicus complexed with double stranded RNA at 2.1-Angstrom Resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

7 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain B: C.1 No protein-ligand interaction detected (PLIP) SO4.2: 1 residues within 4Å: Chain C: C.1 No protein-ligand interaction detected (PLIP) SO4.3: 3 residues within 4Å: Chain E: S.76, E.77, K.149 3 PLIP interactions: 3 interactions with chain E Hydrogen bonds: E:E.77 Water bridges: E:E.78 Salt bridges: E:K.149 SO4.4: 2 residues within 4Å: Chain E: R.208, E.211 1 PLIP interactions: 1 interactions with chain E Salt bridges: E:R.208 SO4.5: 2 residues within 4Å: Chain E: R.163, W.164 1 PLIP interactions: 1 interactions with chain E Salt bridges: E:R.163 SO4.6: 3 residues within 4Å: Chain F: S.76, E.77, K.149 4 PLIP interactions: 4 interactions with chain F Hydrogen bonds: F:E.77 Water bridges: F:E.78, F:E.78 Salt bridges: F:K.149 SO4.7: 3 residues within 4Å: Chain F: R.163, W.164, Y.193 3 PLIP interactions: 3 interactions with chain F Hydrogen bonds: F:W.164, F:Y.193 Salt bridges: F:R.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gan, J. et al., Intermediate states of ribonuclease III in complex with double-stranded RNA. Structure (2005)

Release Date

2005-11-22

Peptides

Ribonuclease III: EF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

E
A

F
B

Ribonuclease III