SMTL ID : 1z0a.3 (6 other biounits)

GDP-Bound Rab2A GTPase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: K.23, S.24, L.41, D.65, A.67 Ligands: GDP.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.65

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 18 residues within 4Å: Chain A: D.18, T.19, G.20, V.21, G.22, K.23, S.24, C.25, F.35, P.37, N.123, K.124, D.126, L.127, S.153, A.154, K.155 Ligands: MG.1 22 PLIP interactions: 22 interactions with chain A Hydrogen bonds: A:G.20, A:V.21, A:G.22, A:K.23, A:S.24, A:C.25, A:N.123, A:K.124, A:K.124, A:A.154, A:K.155, A:K.155, A:K.155 Water bridges: A:K.23, A:K.23, A:S.24, A:S.24 Salt bridges: A:K.23, A:D.126 pi-Stacking: A:F.35, A:F.35 pi-Cation interactions: A:K.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eathiraj, S. et al., Structural basis of family-wide Rab GTPase recognition by rabenosyn-5. Nature (2005)

Release Date

2005-07-26

Peptides

Ras-related protein Rab-2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Ras-related protein Rab-2A

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