SMTL ID : 1z9d.4 (3 other biounits)

Crystal structure of a putative uridylate kinase (UMP-kinase) from Streptococcus pyogenes

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-hexamer

Ligands

18 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: R.101, R.119, H.123, R.128 Chain B: R.119, R.122 Ligands: SO4.2 Ligand excluded by PLIP SO4.2: 5 residues within 4Å: Chain A: R.119, R.122 Chain C: R.101, R.119 Ligands: SO4.1 Ligand excluded by PLIP SO4.3: 4 residues within 4Å: Chain A: S.15, A.162, K.163, N.164 Ligand excluded by PLIP SO4.4: 6 residues within 4Å: Chain A: K.13, S.15, G.16, G.54, G.55, T.143 Ligand excluded by PLIP SO4.5: 5 residues within 4Å: Chain B: R.101, R.119, H.123, R.128 Chain C: R.122 Ligand excluded by PLIP SO4.6: 3 residues within 4Å: Chain B: S.15, K.163, N.164 Ligand excluded by PLIP SO4.7: 6 residues within 4Å: Chain B: S.15, G.16, G.54, G.55, G.56, T.143 Ligand excluded by PLIP SO4.8: 4 residues within 4Å: Chain C: S.15, A.162, K.163, N.164 Ligand excluded by PLIP SO4.9: 5 residues within 4Å: Chain C: K.13, S.15, G.54, G.55, T.143 Ligand excluded by PLIP SO4.10: 7 residues within 4Å: Chain D: R.101, R.119, H.123, R.128 Chain E: R.119, R.122 Ligands: SO4.11 Ligand excluded by PLIP SO4.11: 5 residues within 4Å: Chain D: R.119, R.122 Chain F: R.101, R.119 Ligands: SO4.10 Ligand excluded by PLIP SO4.12: 4 residues within 4Å: Chain D: S.15, A.162, K.163, N.164 Ligand excluded by PLIP SO4.13: 6 residues within 4Å: Chain D: K.13, S.15, G.16, G.54, G.55, T.143 Ligand excluded by PLIP SO4.14: 5 residues within 4Å: Chain E: R.101, R.119, H.123, R.128 Chain F: R.122 Ligand excluded by PLIP SO4.15: 3 residues within 4Å: Chain E: S.15, K.163, N.164 Ligand excluded by PLIP SO4.16: 6 residues within 4Å: Chain E: S.15, G.16, G.54, G.55, G.56, T.143 Ligand excluded by PLIP SO4.17: 4 residues within 4Å: Chain F: S.15, A.162, K.163, N.164 Ligand excluded by PLIP SO4.18: 5 residues within 4Å: Chain F: K.13, S.15, G.54, G.55, T.143 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rajashankar, K.R. et al., Crystal structure of a putative uridylate kinase (UMP-kinase) from Streptococcus pyogenes. To be Published

Release Date

2005-04-19

Peptides

uridylate kinase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

uridylate kinase

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