SMTL ID : 1zel.2 (1 other biounit)

Crystal structure of RV2827C protein from Mycobacterium tuberculosis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 3 residues within 4Å: Chain A: R.167, D.209, D.213 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.209

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 6 residues within 4Å: Chain A: P.86, Y.87, S.108, W.111, Q.119, P.120 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:P.86 Hydrogen bonds: A:Y.87, A:Q.119 ACT.3: 2 residues within 4Å: Chain A: R.123, S.143 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.123

6 x FMT: FORMIC ACID(Non-functional Binders)

FMT.4: 6 residues within 4Å: Chain A: R.226, T.228, W.231, R.254, H.255, T.256 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.228, A:H.255, A:T.256, A:T.256 Water bridges: A:T.228 FMT.5: 4 residues within 4Å: Chain A: P.148, G.225, R.226, P.227 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.226 FMT.6: 2 residues within 4Å: Chain A: V.144, R.146 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.146 Water bridges: A:L.134, A:L.134 FMT.7: 3 residues within 4Å: Chain A: A.252, R.254, E.257 No protein-ligand interaction detected (PLIP) FMT.8: 4 residues within 4Å: Chain A: S.229, R.233, T.262, R.263 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.233, A:R.263 Water bridges: A:R.263 FMT.9: 3 residues within 4Å: Chain A: R.91, L.94, A.95 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Janowski, R. et al., Structural analysis reveals DNA binding properties of Rv2827c, a hypothetical protein from Mycobacterium tuberculosis. J Struct Funct Genomics (2009)

Release Date

2006-05-02

Peptides

hypothetical protein Rv2827c: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

hypothetical protein Rv2827c

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