SMTL ID : 1zhm.1

Crystal Structure of the Catalytic Domain of the Coagulation Factor XIa in Complex with Benzamidine (S434A-T475A-K437 Mutant)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

monomer

Ligands

1 x BEN: BENZAMIDINE(Non-functional Binders)

BEN.1: 12 residues within 4Å: Chain A: D.182, A.183, C.184, K.185, S.188, T.206, S.207, W.208, G.209, G.211, C.212, G.219 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:T.206 Hydrogen bonds: A:D.182, A:A.183 Water bridges: A:W.208, A:W.208, A:E.210

1 x GSH: GLUTATHIONE(Non-covalent)

GSH.2: 7 residues within 4Å: Chain A: W.14, R.110, P.111, I.112, C.113, V.199, W.200 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.110, A:P.111, A:C.113, A:W.200 Salt bridges: A:R.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jin, L. et al., Mutation of surface residues to promote crystallization of activated factor XI as a complex with benzamidine: an essential step for the iterative structure-based design of factor XI inhibitors. Acta Crystallogr.,Sect.D (2005)

Release Date

2005-09-20

Peptides

coagulation factor XI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

coagulation factor XI