- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.08 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.5: 42 residues within 4Å:- Chain A: I.12, G.13, S.14, G.15, P.16, G.17, G.18, I.35, E.36, K.37, N.38, G.43, T.44, C.45, V.48, G.49, C.50, S.53, K.54, G.117, Y.118, G.119, A.147, T.148, G.149, S.150, S.168, I.189, R.280, F.283, L.287, G.319, D.320, M.326, L.327, A.328, H.329, A.331, Y.359
- Chain B: H.452, P.453
- Ligands: NAI.6
29 PLIP interactions:27 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:T.44, A:I.189
- Hydrogen bonds: A:S.14, A:G.17, A:G.18, A:K.37, A:T.44, A:T.44, A:C.45, A:K.54, A:G.119, A:G.119, A:S.150, A:D.320, A:M.326, A:A.328, A:H.329, B:H.452
- Water bridges: A:G.15, A:G.15, A:K.37, A:K.37, A:K.37, A:N.38, A:G.43, A:G.149, A:S.150, B:H.452
- pi-Cation interactions: A:K.37
FAD.11: 40 residues within 4Å:- Chain A: H.452, P.453
- Chain B: I.12, G.13, S.14, G.15, P.16, G.17, I.35, E.36, K.37, N.38, G.43, T.44, C.45, V.48, G.49, C.50, S.53, K.54, G.117, Y.118, G.119, A.147, T.148, G.149, S.150, S.168, I.189, R.280, F.283, G.319, D.320, M.326, L.327, A.328, H.329, A.331, Y.359
- Ligands: NAI.12
30 PLIP interactions:29 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:T.44, B:I.189
- Hydrogen bonds: B:G.17, B:G.18, B:K.37, B:N.38, B:N.38, B:T.44, B:T.44, B:T.44, B:C.45, B:S.53, B:K.54, B:G.119, B:G.119, B:S.150, B:D.320, B:M.326, B:A.328, B:H.329, A:H.452
- Water bridges: B:G.15, B:G.15, B:K.37, B:G.43, B:G.149, B:G.149, B:S.150, B:Y.359
- pi-Cation interactions: B:K.37
- 2 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)
NAI.6: 24 residues within 4Å:- Chain A: K.54, F.155, I.184, G.185, G.187, V.188, I.189, E.192, V.207, E.208, F.209, L.210, T.241, K.242, V.243, C.277, I.278, G.279, R.280, M.326, L.327, V.357, Y.359
- Ligands: FAD.5
16 PLIP interactions:16 interactions with chain A- Hydrophobic interactions: A:V.188, A:I.189
- Hydrogen bonds: A:K.54, A:V.188, A:I.189, A:E.192, A:F.209, A:V.243, A:V.243, A:G.279, A:M.326
- Water bridges: A:A.186, A:G.187, A:G.190, A:G.215, A:V.357
NAI.12: 21 residues within 4Å:- Chain B: K.54, F.155, I.184, G.185, A.186, G.187, V.188, I.189, E.192, E.208, F.209, L.210, C.277, I.278, G.279, R.280, M.326, L.327, V.357, Y.359
- Ligands: FAD.11
17 PLIP interactions:17 interactions with chain B- Hydrophobic interactions: B:V.188, B:I.189
- Hydrogen bonds: B:K.54, B:A.186, B:V.188, B:I.189, B:E.192, B:F.209, B:G.279, B:M.326
- Water bridges: B:G.187, B:G.190, B:G.215, B:V.243, B:V.357, B:V.357, B:V.357
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Brautigam, C.A. et al., Crystal Structure of Human Dihydrolipoamide Dehydrogenase: NAD+/NADH Binding and the Structural Basis of Disease-causing Mutations. J.Mol.Biol. (2005)
- Release Date
- 2005-06-28
- Peptides
- Dihydrolipoyl dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
GB
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.08 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Brautigam, C.A. et al., Crystal Structure of Human Dihydrolipoamide Dehydrogenase: NAD+/NADH Binding and the Structural Basis of Disease-causing Mutations. J.Mol.Biol. (2005)
- Release Date
- 2005-06-28
- Peptides
- Dihydrolipoyl dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
GB
H