SMTL ID : 1zmt.1

Structure of haloalcohol dehalogenase HheC of Agrobacterium radiobacter AD1 in complex with (R)-para-nitro styrene oxide, with a water molecule in the halide-binding site

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-tetramer

Ligands

4 x RNO: (R)-PARA-NITROSTYRENE OXIDE(Non-covalent)

RNO.1: 11 residues within 4Å: Chain A: F.12, P.84, F.86, S.132, W.139, Y.145, P.175, N.176, F.186, Y.187 Chain C: W.249 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain C Hydrophobic interactions: A:W.139, A:Y.145, A:F.186, A:F.186, C:W.249 RNO.2: 11 residues within 4Å: Chain B: F.12, P.84, F.86, S.132, W.139, Y.145, P.175, N.176, F.186, Y.187 Chain D: W.249 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain D Hydrophobic interactions: B:W.139, B:Y.145, D:W.249 pi-Stacking: B:F.186 RNO.3: 11 residues within 4Å: Chain A: W.249 Chain C: F.12, P.84, F.86, S.132, W.139, Y.145, P.175, N.176, F.186, Y.187 5 PLIP interactions: 4 interactions with chain C, 1 interactions with chain A Hydrophobic interactions: C:W.139, C:Y.145, A:W.249 Hydrogen bonds: C:Y.145 pi-Stacking: C:F.186 RNO.4: 11 residues within 4Å: Chain B: W.249 Chain D: F.12, P.84, F.86, S.132, W.139, Y.145, P.175, N.176, F.186, Y.187 5 PLIP interactions: 1 interactions with chain B, 4 interactions with chain D Hydrophobic interactions: B:W.249, D:W.139, D:Y.145 Hydrogen bonds: D:Y.145 pi-Stacking: D:F.186

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

de Jong, R.M. et al., Structural Basis for the Enantioselectivity of an Epoxide Ring Opening Reaction Catalyzed by Halo Alcohol Dehalogenase HheC. J.Am.Chem.Soc. (2005)

Release Date

2005-10-04

Peptides

Haloalcohol dehalogenase HheC: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Haloalcohol dehalogenase HheC

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