SMTL ID : 1zov.1 (1 other biounit)

Crystal Structure of Monomeric Sarcosine Oxidase from Bacillus sp. NS-129

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.86 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: Y.317, T.318, F.342, S.343, G.344 Ligands: FAD.2 Ligand excluded by PLIP

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Covalent)

FAD.2: 35 residues within 4Å: Chain A: V.9, G.10, G.12, S.13, M.14, V.32, D.33, S.34, F.35, H.39, G.42, S.43, H.44, R.49, I.50, P.172, V.173, S.200, M.201, G.202, W.204, L.208, Q.223, V.225, Y.254, C.315, M.316, Y.317, F.342, G.344, H.345, G.346, F.347, K.348 Ligands: CL.1 31 PLIP interactions: 31 interactions with chain A Hydrophobic interactions: A:V.225, A:Y.254 Hydrogen bonds: A:S.13, A:S.13, A:M.14, A:S.34, A:S.34, A:H.39, A:S.43, A:H.44, A:R.49, A:R.49, A:I.50, A:I.50, A:V.173, A:V.173, A:G.202, A:G.346, A:F.347, A:K.348, A:K.348 Water bridges: A:G.12, A:G.15, A:R.49, A:R.49, A:A.203, A:Y.317 Salt bridges: A:H.44 pi-Stacking: A:Y.317 pi-Cation interactions: A:R.49, A:R.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nagata, K. et al., Crystal structure of monomeric sarcosine oxidase from Bacillus sp. NS-129 reveals multiple conformations at the active-site loop. PROC.JPN.ACAD.,SER.B (2005)

Release Date

2006-05-23

Peptides

Monomeric sarcosine oxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Monomeric sarcosine oxidase

Related Entries With Identical Sequence