SMTL ID : 2aj7.3 (2 other biounits)

Crystal structure of a putative contractile protein (bh3618) from bacillus halodurans at 1.67 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

homo-hexamer

Ligands

36 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: N.75, F.77, V.103, A.104, I.105, F.106 Chain C: K.160 Ligand excluded by PLIP EDO.2: 5 residues within 4Å: Chain A: F.80, E.82, Y.83, L.122, Y.145 Ligand excluded by PLIP EDO.3: 4 residues within 4Å: Chain A: D.43, E.44, K.65, T.66 Ligand excluded by PLIP EDO.4: 7 residues within 4Å: Chain A: P.39, L.108, N.121, A.124, Q.137, V.139, R.147 Ligand excluded by PLIP EDO.12: 6 residues within 4Å: Chain B: H.11, H.12, M.13, A.27, E.28, D.29 Ligand excluded by PLIP EDO.13: 5 residues within 4Å: Chain B: A.54, G.55, T.56, Y.59 Ligands: FMT.21 Ligand excluded by PLIP EDO.14: 7 residues within 4Å: Chain B: L.87, I.92, I.97, N.99, E.100, V.103 Ligands: FMT.20 Ligand excluded by PLIP EDO.15: 6 residues within 4Å: Chain B: N.75, F.77, V.103, A.104, I.105, F.106 Ligand excluded by PLIP EDO.16: 8 residues within 4Å: Chain A: Y.20, S.21 Chain B: E.25, V.26, R.30, L.50, P.51 Ligands: EDO.18 Ligand excluded by PLIP EDO.17: 5 residues within 4Å: Chain B: N.121, A.124, Q.137, V.139, R.147 Ligand excluded by PLIP EDO.18: 8 residues within 4Å: Chain A: Y.20, S.21 Chain B: S.21, L.24, L.50, P.51 Ligands: EDO.16, EDO.19 Ligand excluded by PLIP EDO.19: 8 residues within 4Å: Chain A: F.52 Chain B: Y.20, S.21, L.50, P.51, F.52, T.60 Ligands: EDO.18 Ligand excluded by PLIP EDO.22: 7 residues within 4Å: Chain C: N.75, F.77, V.103, A.104, I.105, F.106 Chain E: K.160 Ligand excluded by PLIP EDO.23: 5 residues within 4Å: Chain C: F.80, E.82, Y.83, L.122, Y.145 Ligand excluded by PLIP EDO.24: 4 residues within 4Å: Chain C: D.43, E.44, K.65, T.66 Ligand excluded by PLIP EDO.25: 7 residues within 4Å: Chain C: P.39, L.108, N.121, A.124, Q.137, V.139, R.147 Ligand excluded by PLIP EDO.33: 6 residues within 4Å: Chain D: H.11, H.12, M.13, A.27, E.28, D.29 Ligand excluded by PLIP EDO.34: 5 residues within 4Å: Chain D: A.54, G.55, T.56, Y.59 Ligands: FMT.42 Ligand excluded by PLIP EDO.35: 7 residues within 4Å: Chain D: L.87, I.92, I.97, N.99, E.100, V.103 Ligands: FMT.41 Ligand excluded by PLIP EDO.36: 6 residues within 4Å: Chain D: N.75, F.77, V.103, A.104, I.105, F.106 Ligand excluded by PLIP EDO.37: 8 residues within 4Å: Chain C: Y.20, S.21 Chain D: E.25, V.26, R.30, L.50, P.51 Ligands: EDO.39 Ligand excluded by PLIP EDO.38: 5 residues within 4Å: Chain D: N.121, A.124, Q.137, V.139, R.147 Ligand excluded by PLIP EDO.39: 8 residues within 4Å: Chain C: Y.20, S.21 Chain D: S.21, L.24, L.50, P.51 Ligands: EDO.37, EDO.40 Ligand excluded by PLIP EDO.40: 8 residues within 4Å: Chain C: F.52 Chain D: Y.20, S.21, L.50, P.51, F.52, T.60 Ligands: EDO.39 Ligand excluded by PLIP EDO.43: 7 residues within 4Å: Chain A: K.160 Chain E: N.75, F.77, V.103, A.104, I.105, F.106 Ligand excluded by PLIP EDO.44: 5 residues within 4Å: Chain E: F.80, E.82, Y.83, L.122, Y.145 Ligand excluded by PLIP EDO.45: 4 residues within 4Å: Chain E: D.43, E.44, K.65, T.66 Ligand excluded by PLIP EDO.46: 7 residues within 4Å: Chain E: P.39, L.108, N.121, A.124, Q.137, V.139, R.147 Ligand excluded by PLIP EDO.54: 6 residues within 4Å: Chain F: H.11, H.12, M.13, A.27, E.28, D.29 Ligand excluded by PLIP EDO.55: 5 residues within 4Å: Chain F: A.54, G.55, T.56, Y.59 Ligands: FMT.63 Ligand excluded by PLIP EDO.56: 7 residues within 4Å: Chain F: L.87, I.92, I.97, N.99, E.100, V.103 Ligands: FMT.62 Ligand excluded by PLIP EDO.57: 6 residues within 4Å: Chain F: N.75, F.77, V.103, A.104, I.105, F.106 Ligand excluded by PLIP EDO.58: 8 residues within 4Å: Chain E: Y.20, S.21 Chain F: E.25, V.26, R.30, L.50, P.51 Ligands: EDO.60 Ligand excluded by PLIP EDO.59: 5 residues within 4Å: Chain F: N.121, A.124, Q.137, V.139, R.147 Ligand excluded by PLIP EDO.60: 8 residues within 4Å: Chain E: Y.20, S.21 Chain F: S.21, L.24, L.50, P.51 Ligands: EDO.58, EDO.61 Ligand excluded by PLIP EDO.61: 8 residues within 4Å: Chain E: F.52 Chain F: Y.20, S.21, L.50, P.51, F.52, T.60 Ligands: EDO.60 Ligand excluded by PLIP

21 x FMT: FORMIC ACID(Non-functional Binders)

FMT.5: 3 residues within 4Å: Chain A: T.143, A.144, Y.145 Ligand excluded by PLIP FMT.6: 6 residues within 4Å: Chain A: G.55, T.56, P.57, S.78 Chain B: F.115 Ligands: FMT.7 Ligand excluded by PLIP FMT.7: 5 residues within 4Å: Chain A: A.54, G.55, T.56, Y.59 Ligands: FMT.6 Ligand excluded by PLIP FMT.8: 4 residues within 4Å: Chain A: L.69, A.70, F.71 Ligands: FMT.9 Ligand excluded by PLIP FMT.9: 6 residues within 4Å: Chain A: A.70, F.71, I.72, L.108, L.109 Ligands: FMT.8 Ligand excluded by PLIP FMT.20: 3 residues within 4Å: Chain B: T.98, N.99 Ligands: EDO.14 Ligand excluded by PLIP FMT.21: 6 residues within 4Å: Chain A: F.115 Chain B: G.55, T.56, P.57, S.78 Ligands: EDO.13 Ligand excluded by PLIP FMT.26: 3 residues within 4Å: Chain C: T.143, A.144, Y.145 Ligand excluded by PLIP FMT.27: 6 residues within 4Å: Chain C: G.55, T.56, P.57, S.78 Chain D: F.115 Ligands: FMT.28 Ligand excluded by PLIP FMT.28: 5 residues within 4Å: Chain C: A.54, G.55, T.56, Y.59 Ligands: FMT.27 Ligand excluded by PLIP FMT.29: 4 residues within 4Å: Chain C: L.69, A.70, F.71 Ligands: FMT.30 Ligand excluded by PLIP FMT.30: 6 residues within 4Å: Chain C: A.70, F.71, I.72, L.108, L.109 Ligands: FMT.29 Ligand excluded by PLIP FMT.41: 3 residues within 4Å: Chain D: T.98, N.99 Ligands: EDO.35 Ligand excluded by PLIP FMT.42: 6 residues within 4Å: Chain C: F.115 Chain D: G.55, T.56, P.57, S.78 Ligands: EDO.34 Ligand excluded by PLIP FMT.47: 3 residues within 4Å: Chain E: T.143, A.144, Y.145 Ligand excluded by PLIP FMT.48: 6 residues within 4Å: Chain E: G.55, T.56, P.57, S.78 Chain F: F.115 Ligands: FMT.49 Ligand excluded by PLIP FMT.49: 5 residues within 4Å: Chain E: A.54, G.55, T.56, Y.59 Ligands: FMT.48 Ligand excluded by PLIP FMT.50: 4 residues within 4Å: Chain E: L.69, A.70, F.71 Ligands: FMT.51 Ligand excluded by PLIP FMT.51: 6 residues within 4Å: Chain E: A.70, F.71, I.72, L.108, L.109 Ligands: FMT.50 Ligand excluded by PLIP FMT.62: 3 residues within 4Å: Chain F: T.98, N.99 Ligands: EDO.56 Ligand excluded by PLIP FMT.63: 6 residues within 4Å: Chain E: F.115 Chain F: G.55, T.56, P.57, S.78 Ligands: EDO.55 Ligand excluded by PLIP

3 x NI: NICKEL (II) ION(Non-covalent)

NI.10: 2 residues within 4Å: Chain B: H.10, H.12 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:H.10, B:H.12 NI.31: 2 residues within 4Å: Chain D: H.10, H.12 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:H.10, D:H.12 NI.52: 2 residues within 4Å: Chain F: H.10, H.12 2 PLIP interactions: 2 interactions with chain F Metal complexes: F:H.10, F:H.12

3 x K: POTASSIUM ION(Non-covalent)

K.11: 2 residues within 4Å: Chain B: D.43, K.65 No protein-ligand interaction detected (PLIP) K.32: 2 residues within 4Å: Chain D: D.43, K.65 No protein-ligand interaction detected (PLIP) K.53: 2 residues within 4Å: Chain F: D.43, K.65 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of hypothetical protein (10176242) from Bacillus halodurans at 1.67 A resolution. To be published

Release Date

2005-11-15

Peptides

hypothetical protein BH3618: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

hypothetical protein BH3618

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