SMTL ID : 2bkj.1

NADPH:FMN OXIDOREDUCTASE FROM VIBRIO HARVEYI COMPLEXED WITH NAD+

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

homo-dimer

Ligands

2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 20 residues within 4Å: Chain A: H.11, R.12, S.13, R.15, Q.67, Y.69, V.127, Y.128, I.129, G.130, G.131, K.167, R.169 Chain B: S.38, S.39, S.40, M.42, V.106, D.107, I.110 21 PLIP interactions: 6 interactions with chain B, 15 interactions with chain A Hydrophobic interactions: B:V.106, B:I.110, A:Y.128 Hydrogen bonds: B:S.38, B:S.38, B:S.39, A:S.13, A:S.13, A:R.15, A:Q.67, A:Q.67, A:G.130, A:G.131 Water bridges: B:S.38, A:R.15, A:R.15, A:K.167, A:K.167, A:R.169 Salt bridges: A:H.11, A:R.169 FMN.2: 22 residues within 4Å: Chain A: S.38, S.39, S.40, S.41, M.42, V.106, D.107, I.110 Chain B: H.11, R.12, S.13, R.15, Q.67, Y.69, V.127, Y.128, I.129, G.130, G.131, K.167, R.169 Ligands: NAD.3 24 PLIP interactions: 8 interactions with chain A, 16 interactions with chain B Hydrophobic interactions: A:V.106, A:I.110, B:Y.128 Hydrogen bonds: A:S.38, A:S.38, A:S.39, A:S.41, A:M.42, B:S.13, B:S.13, B:R.15, B:Q.67, B:Q.67, B:Y.69, B:G.130, B:G.131 Water bridges: A:S.38, B:K.167, B:K.167, B:R.169, B:R.169 Salt bridges: B:H.11, B:K.167, B:R.169

1 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.3: 11 residues within 4Å: Chain A: S.41 Chain B: R.15, A.64, G.65, Q.67, Y.69, G.130, G.131, N.134, R.225 Ligands: FMN.2 10 PLIP interactions: 8 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:R.15, B:G.65, B:Q.67, B:N.134, B:N.134, A:S.41, A:S.41 Water bridges: B:K.219, B:K.219 Salt bridges: B:R.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tanner, J.J. et al., Unusual folded conformation of nicotinamide adenine dinucleotide bound to flavin reductase P. Protein Sci. (1999)

Release Date

1999-09-10

Peptides

FLAVIN REDUCTASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

FLAVIN REDUCTASE

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