SMTL ID : 2bov.1

Molecular recognition of an ADP-ribosylating Clostridium botulinum C3 exoenzyme by RalA GTPase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.66 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 20 residues within 4Å: Chain A: S.22, G.23, G.24, V.25, G.26, K.27, S.28, A.29, F.39, E.41, D.42, Y.43, N.127, K.128, D.130, L.131, S.157, A.158, K.159 Ligands: MG.2 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:S.22, A:G.24, A:V.25, A:G.26, A:K.27, A:S.28, A:A.29, A:D.42, A:D.42, A:N.127, A:K.128, A:K.128, A:A.158, A:K.159 Water bridges: A:K.27, A:S.28, A:S.28, A:Y.43, A:Y.43, A:P.45 Salt bridges: A:K.27, A:D.130 pi-Stacking: A:F.39, A:F.39

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: S.28 Ligands: GDP.1 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:S.28, H2O.2, H2O.2, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Holbourn, K.P. et al., Molecular Recognition of an Adp-Ribosylating Clostridium Botulinum C3 Exoenzyme by Rala Gtpase. Proc.Natl.Acad.Sci.USA (2005)

Release Date

2005-04-15

Peptides

RAS-RELATED PROTEIN RAL-A: A
MONO-ADP-RIBOSYLTRANSFERASE C3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RAS-RELATED PROTEIN RAL-A

MONO-ADP-RIBOSYLTRANSFERASE C3