SMTL ID : 2bpn.1

SOLUTION STRUCTURE OF DESULFOVIBRIO VULGARIS (HILDENBOROUGH) FERRICYTOCHROME C3, NMR, 20 STRUCTURES

Coordinates

PDB Format

Method

SOLUTION NMR

Oligo State

monomer

Ligands

4 x HEC: HEME C(Covalent)

HEC.1: 22 residues within 4Å: Chain A: P.2, K.3, A.4, P.5, L.9, M.11, F.20, H.22, H.25, V.28, K.29, C.30, D.32, C.33, H.34, Y.43, R.44, K.45, C.46, Y.65 Ligands: HEC.2, HEC.3 12 PLIP interactions: 12 interactions with chain A, Hydrophobic interactions: A:P.2, A:P.5, A:L.9, A:L.9, A:F.20, A:F.20, A:H.25, A:V.28, A:Y.43 pi-Stacking: A:H.22 Metal complexes: A:H.22, A:H.34 HEC.2: 23 residues within 4Å: Chain A: C.33, H.34, H.35, V.37, N.38, D.42, R.44, K.45, C.46, G.47, T.48, C.51, H.52, A.62, H.67, V.68, M.69, T.74, K.75, F.76, K.77, S.78 Ligands: HEC.1 11 PLIP interactions: 11 interactions with chain A, Hydrophobic interactions: A:A.62, A:V.68, A:T.74, A:F.76, A:F.76, A:F.76 Hydrogen bonds: A:K.75 Salt bridges: A:H.67 pi-Stacking: A:F.76 Metal complexes: A:H.35, A:H.52 HEC.3: 21 residues within 4Å: Chain A: M.11, V.18, V.19, F.20, T.24, H.25, V.28, D.32, C.33, K.77, S.78, C.79, C.82, H.83, V.86, K.93, L.97, K.104, C.105 Ligands: HEC.1, HEC.4 9 PLIP interactions: 9 interactions with chain A, Hydrophobic interactions: A:V.18, A:V.28, A:K.104, A:K.104 Salt bridges: A:K.93 pi-Stacking: A:H.25, A:H.83 Metal complexes: A:H.25, A:H.83 HEC.4: 23 residues within 4Å: Chain A: M.11, E.12, A.13, T.14, Q.16, V.18, M.55, K.57, Y.65, Y.66, M.69, H.70, C.79, V.80, H.83, L.97, T.98, G.99, C.100, S.103, C.105, H.106 Ligands: HEC.3 12 PLIP interactions: 12 interactions with chain A, Hydrophobic interactions: A:Q.16, A:V.18, A:Y.66, A:Y.66, A:V.80 Hydrogen bonds: A:A.13, A:T.14, A:T.14, A:T.14 pi-Stacking: A:Y.66 Metal complexes: A:H.70, A:H.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Messias, A.C. et al., Solution Structures of Tetrahaem Ferricytochrome C(3) from Desulfovibrio Vulgaris (Hildenborough) and its K45Q Mutant: The Molecular Basis of Cooperativity. Biochim.Biophys.Acta (2006)

Release Date

2006-03-15

Peptides

CYTOCHROME C3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CYTOCHROME C3

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