SMTL ID : 2bpo.1 (1 other biounit)

Crystal structure of the yeast CPR triple mutant: D74G, Y75F, K78A.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 24 residues within 4Å: Chain A: H.297, G.355, P.356, Y.396, F.397, N.398, R.430, Y.431, Y.432, S.433, T.448, S.449, I.450, E.452, F.454, V.465, V.466, G.467, V.468, T.469, T.470, W.682 Ligands: FMN.2, NAP.3 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:Y.431, A:W.682, A:W.682, A:W.682 Hydrogen bonds: A:G.355, A:N.398, A:Y.431, A:Y.431, A:Y.432, A:S.433, A:T.448, A:I.450, A:E.452, A:E.452, A:V.468, A:T.469, A:T.470, A:T.470 Water bridges: A:F.397 Salt bridges: A:R.430, A:R.430 pi-Stacking: A:W.682, A:W.682

1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.2: 21 residues within 4Å: Chain A: S.58, Q.59, T.60, G.61, T.62, A.63, S.107, T.108, Y.109, G.110, L.143, G.144, N.145, Y.148, E.149, F.150, F.151, N.152, D.178, V.681 Ligands: FAD.1 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:Y.109, A:Y.109, A:Y.148 Hydrogen bonds: A:Q.59, A:T.60, A:G.61, A:T.62, A:T.62, A:A.63, A:S.107, A:S.107, A:T.108, A:T.108, A:G.110, A:N.145, A:F.150, A:N.152, A:D.178 Water bridges: A:T.62, A:D.178 pi-Stacking: A:Y.148, A:Y.148

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.3: 20 residues within 4Å: Chain A: R.276, I.450, E.452, P.532, G.533, T.534, G.570, S.571, R.572, S.601, R.602, K.608, Y.610, Q.612, D.637, A.638, K.639, G.640, M.641 Ligands: FAD.1 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:R.276, A:I.450, A:T.534, A:S.571, A:S.601, A:S.601, A:Y.610, A:Y.610, A:Q.612, A:G.640 Water bridges: A:R.572, A:R.602, A:D.637, A:A.638 Salt bridges: A:R.602, A:K.608 pi-Stacking: A:Y.610, A:Y.610

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 4 residues within 4Å: Chain A: S.273, D.275, R.276, N.573 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.273, A:D.275, A:R.276, A:R.572, A:N.573 Water bridges: A:R.276, A:R.276 Salt bridges: A:R.276 SO4.5: 2 residues within 4Å: Chain A: D.617, Y.618 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yermalitskaya, L.V. et al., Crystal Structure of the Yeast Cpr Triple Mutant: D74G, Y75F, K78A. To be Published

Release Date

2006-07-13

Peptides

NADPH-CYTOCHROM P450 REDUCTASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NADPH-CYTOCHROM P450 REDUCTASE

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