SMTL ID : 2btd.1

Crystal structure of DhaL from E. coli

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 20 residues within 4Å: Chain A: D.30, D.35, D.37, H.38, N.41, G.78, A.79, S.80, L.83, G.121, T.129, M.130, G.177, R.178, D.191, P.192, G.193, A.194 Ligands: MG.2, MG.3 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:N.41, A:A.79, A:S.80, A:G.121, A:M.130, A:D.191, A:G.193, A:A.194 Water bridges: A:D.30, A:D.35, A:G.177, A:R.178 Salt bridges: A:H.38, A:R.178

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: D.30, D.35, D.37 Ligands: ADP.1 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.30, A:D.30, A:D.35, A:D.37, H2O.1 MG.3: 5 residues within 4Å: Chain A: D.35, D.37, G.78, R.178 Ligands: ADP.1 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.35, A:D.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oberholzer, A.E. et al., Crystal Structure of the Nucleotide-Binding Subunit Dhal of the Escherichia Coli Dihydroxyacetone Kinase. J.Mol.Biol. (2006)

Release Date

2006-06-22

Peptides

PTS-DEPENDENT DIHYDROXYACETONE KINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PTS-DEPENDENT DIHYDROXYACETONE KINASE