SMTL ID : 2bya.1

Is radiation damage dependent on the dose-rate used during macromolecular crystallography data collection

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x BEN: BENZAMIDINE(Non-functional Binders)

BEN.1: 11 residues within 4Å: Chain A: D.191, S.192, C.193, Q.194, S.197, V.211, W.213, G.214, G.216, C.217, G.224 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.211 Hydrogen bonds: A:D.191, A:S.192, A:G.216 Water bridges: A:V.225

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: V.78, E.82, Q.83, F.84 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.82, A:F.84

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain A: K.169, P.173, G.174 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.174 Water bridges: A:Q.175, A:I.176 SO4.4: 2 residues within 4Å: Chain A: K.89, K.109 3 PLIP interactions: 3 interactions with chain A Water bridges: A:S.88 Salt bridges: A:K.89, A:K.109

1 x CA: CALCIUM ION(Non-covalent)

CA.5: 4 residues within 4Å: Chain A: E.72, N.74, V.77, E.82 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.72, A:N.74, A:V.77, A:E.82, H2O.5, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Leiros, H.-K.S. et al., Is Radiation Damage Dependent on the Dose-Rate Used During Macromolecular Crystallography Data Collection?. Acta Crystallogr.,Sect.D (2006)

Release Date

2006-02-06

Peptides

CATIONIC TRYPSIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

CATIONIC TRYPSIN

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