SMTL ID : 2cck.1

CRYSTAL STRUCTURE OF UNLIGANDED S. AUREUS THYMIDYLATE KINASE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.21 Å

Oligo State

homo-dimer

Ligands

5 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: N.132, S.180, V.181, N.182 Ligand excluded by PLIP CL.2: 2 residues within 4Å: Chain A: P.186, L.187 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: T.35, R.36, G.39, K.77 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain A: P.80, K.83 Ligand excluded by PLIP CL.6: 2 residues within 4Å: Chain B: P.186, L.187 Ligand excluded by PLIP

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 5 residues within 4Å: Chain A: R.71, L.74, I.79, I.120, N.121 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.71, A:R.71, A:I.120, A:N.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kotaka, M. et al., Structures of S. Aureus Thymidylate Kinase Reveal an Atypical Active Site Configuration and an Intermediate Conformational State Upon Substrate Binding. Protein Sci. (2006)

Release Date

2006-03-08

Peptides

THYMIDYLATE KINASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

THYMIDYLATE KINASE

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