SMTL ID : 2cet.2 (1 other biounit)

Beta-glucosidase from Thermotoga maritima in complex with phenethyl- substituted glucoimidazole

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.97 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: D.300, S.303, E.304 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.300, A:E.304, H2O.8

1 x PGI: (5R,6R,7S,8S)-5-(HYDROXYMETHYL)-2-(2-PHENYLETHYL)-1,5,6,7,8,8A-HEXAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL(Non-covalent)

PGI.2: 15 residues within 4Å: Chain A: Q.42, H.143, W.144, N.187, E.188, V.191, H.202, N.244, Y.317, W.346, E.373, W.420, E.427, W.428, F.436 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.191, A:N.244, A:Y.317, A:W.346 Hydrogen bonds: A:Q.42, A:Q.42, A:H.143, A:N.187, A:E.188, A:E.427 Water bridges: A:N.425

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gloster, T.M. et al., Structural, Kinetic, and Thermodynamic Analysis of Glucoimidazole-Derived Glycosidase Inhibitors. Biochemistry (2006)

Release Date

2006-09-27

Peptides

BETA-GLUCOSIDASE A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

BETA-GLUCOSIDASE A

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