SMTL ID : 2cth.2 (1 other biounit)

CYTOCHROME C3 FROM DESULFOVIBRIO VULGARIS HILDENBOROUGH

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

monomer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Covalent)

HEM.1: 21 residues within 4Å: Chain A: M.11, E.12, A.13, T.14, K.15, Q.16, P.17, V.18, Y.65, Y.66, M.69, H.70, C.79, V.80, H.83, L.97, T.98, G.99, C.100, C.105, H.106 15 PLIP interactions: 15 interactions with chain A, Hydrophobic interactions: A:M.11, A:Q.16, A:V.18, A:Y.65, A:Y.66, A:V.80 Hydrogen bonds: A:A.13, A:T.14, A:K.15, A:Q.16 Water bridges: A:M.55 Salt bridges: A:K.57 pi-Stacking: A:Y.66 Metal complexes: A:H.70, A:H.106 HEM.2: 15 residues within 4Å: Chain A: C.33, H.34, H.35, V.37, D.42, R.44, K.45, C.46, C.51, H.52, H.67, V.68, T.74, K.75, F.76 9 PLIP interactions: 9 interactions with chain A, Hydrophobic interactions: A:V.37, A:V.68 Hydrogen bonds: A:K.75 Water bridges: A:K.75 Salt bridges: A:H.67, A:K.75 pi-Stacking: A:F.76 Metal complexes: A:H.35, A:H.52 HEM.3: 17 residues within 4Å: Chain A: P.2, K.3, P.5, L.9, M.11, F.20, H.22, H.25, V.28, K.29, C.30, C.33, H.34, Y.43, K.45, C.46 Ligands: HEM.4 17 PLIP interactions: 17 interactions with chain A, Hydrophobic interactions: A:P.2, A:P.5, A:L.9, A:F.20, A:F.20, A:F.20, A:V.28, A:Y.43, A:Y.43 Hydrogen bonds: A:C.46 Water bridges: A:E.12, A:Y.43, A:K.45 Salt bridges: A:K.45, A:K.45 Metal complexes: A:H.22, A:H.34 HEM.4: 15 residues within 4Å: Chain A: V.18, F.20, N.21, T.24, H.25, K.77, S.78, C.79, C.82, H.83, V.86, K.93, L.97, K.104 Ligands: HEM.3 13 PLIP interactions: 13 interactions with chain A, Hydrophobic interactions: A:V.18, A:V.86, A:L.97, A:K.104, A:K.104 Hydrogen bonds: A:N.21, A:T.24 Water bridges: A:N.21 Salt bridges: A:K.93 pi-Stacking: A:F.20, A:H.83 Metal complexes: A:H.25, A:H.83

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Simoes, P. et al., Refinement of the Three-Dimensional Structures of Cytochromes C3 from Desulfovibrio Vulgaris Hildenborough at 1.67 Angstrom Resolution and from Desulfovibrio Desulfuricans Atcc 27774 at 1.6 Angstrom Resolution. Inorg.Chim.Acta. (1998)

Release Date

1997-12-24

Peptides

CYTOCHROME C3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

CYTOCHROME C3

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