SMTL ID : 2dd8.1 (1 other biounit)

Crystal Structure of SARS-CoV Spike Receptor-Binding Domain Complexed with Neutralizing Antibody

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 3 residues within 4Å: Chain A: S.161, N.202, D.213 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.158 Water bridges: A:K.211

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 5 residues within 4Å: Chain C: F.9, G.10, F.13, N.14, V.38 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:F.13 Hydrogen bonds: C:N.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Prabakaran, P. et al., Structure of Severe Acute Respiratory Syndrome Coronavirus Receptor-binding Domain Complexed with Neutralizing Antibody. J.Biol.Chem. (2006)

Release Date

2006-04-04

Peptides

IGG Heavy Chain: A
IGG Light Chain: B
Spike glycoprotein: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
S

IGG Heavy Chain

IGG Light Chain

Spike glycoprotein

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