SMTL ID : 2dlf.1

HIGH RESOLUTION CRYSTAL STRUCTURE OF THE FV FRAGMENT FROM AN ANTI-DANSYL SWITCH VARIANT ANTIBODY IGG2A(S) CRYSTALLIZED AT PH 6.75

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: H.31, S.32 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.32 Water bridges: A:G.34 SO4.2: 5 residues within 4Å: Chain B: F.27, T.28, F.29, S.30, R.79 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:F.29, B:S.30 Water bridges: B:S.30, B:D.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakasako, M. et al., The pH-dependent structural variation of complementarity-determining region H3 in the crystal structures of the Fv fragment from an anti-dansyl monoclonal antibody. J.Mol.Biol. (1999)

Release Date

1999-12-17

Peptides

PROTEIN (ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S)-KAPPA (LIGHT CHAIN)): A
PROTEIN (ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S) (HEAVY CHAIN)): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

PROTEIN (ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S)-KAPPA (LIGHT CHAIN))

PROTEIN (ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S) (HEAVY CHAIN))

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