SMTL ID : 2dpm.1

DPNM DNA ADENINE METHYLTRANSFERASE FROM STREPTOCCOCUS PNEUMONIAE COMPLEXED WITH S-ADENOSYLMETHIONINE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x HG: MERCURY (II) ION(Non-covalent)

HG.1: 2 residues within 4Å: Chain A: C.70, I.121 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.70

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.2: 22 residues within 4Å: Chain A: W.17, T.18, G.19, G.20, K.21, P.42, F.43, V.44, G.45, G.46, G.47, A.48, D.62, F.63, N.64, G.176, D.177, F.178, D.194, P.195, P.196, F.214 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:W.17, A:K.21, A:G.45, A:G.46, A:G.47, A:A.48, A:F.63, A:D.177, A:F.178, A:D.194, A:D.194 Water bridges: A:W.17 Salt bridges: A:D.194

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tran, P.H. et al., Crystal structure of the DpnM DNA adenine methyltransferase from the DpnII restriction system of streptococcus pneumoniae bound to S-adenosylmethionine. Structure (1998)

Release Date

1998-12-23

Peptides

PROTEIN (ADENINE-SPECIFIC METHYLTRANSFERASE DPNII 1): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN (ADENINE-SPECIFIC METHYLTRANSFERASE DPNII 1)