SMTL ID : 2ebf.1

Crystal structures reveal a thiol-protease like catalytic triad in the C-terminal region of Pasteurella multocida toxin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

2 x GLC- GLC: alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 6 residues within 4Å: Chain A: L.104, F.188, R.189, G.190, A.192, R.312 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.190, A:R.312, A:R.312 Water bridges: A:R.189, A:A.192, A:A.192 GLC-GLC.2: 6 residues within 4Å: Chain A: D.103, K.138, K.139, L.142, Q.143, K.147 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.103, A:K.147 Salt bridges: A:K.147

1 x 2PO: PHOSPHONATE(Non-covalent)

2PO.3: 5 residues within 4Å: Chain A: G.624, S.625, C.626, D.627, S.628 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.627, A:D.627, A:S.628

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kitadokoro, K. et al., Crystal structures reveal a thiol protease-like catalytic triad in the C-terminal region of Pasteurella multocida toxin. Proc.Natl.Acad.Sci.Usa (2007)

Release Date

2007-03-06

Peptides

Dermonecrotic toxin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

Dermonecrotic toxin