SMTL ID : 2euh.1

HOLO FORM OF A NADP DEPENDENT ALDEHYDE DEHYDROGENASE COMPLEX WITH NADP+

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-tetramer

Ligands

4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 32 residues within 4Å: Chain A: I.150, S.151, P.152, F.153, N.154, L.159, K.177, P.178, P.179, T.180, G.208, R.209, G.210, G.214, D.215, V.218, F.228, T.229, G.230, S.231, I.234, R.237, E.250, L.251, G.252, G.253, C.284, E.377, F.379, L.405, R.437, F.444 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:P.152, A:L.159, A:T.229 Hydrogen bonds: A:S.151, A:F.153, A:T.180, A:G.210, A:D.215, A:D.215, A:S.231, A:L.251, A:G.253, A:E.377 Water bridges: A:S.211, A:S.211 Salt bridges: A:K.177 NAP.4: 31 residues within 4Å: Chain B: I.150, S.151, P.152, F.153, N.154, L.159, K.177, P.178, P.179, T.180, G.208, R.209, G.210, G.214, D.215, V.218, F.228, T.229, G.230, S.231, I.234, E.250, L.251, G.252, G.253, C.284, E.377, F.379, L.405, R.437, F.444 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:P.152, B:L.159, B:T.229 Hydrogen bonds: B:S.151, B:F.153, B:T.180, B:G.208, B:G.210, B:D.215, B:D.215, B:S.231, B:L.251, B:G.253, B:E.377, B:R.437 Salt bridges: B:K.177 NAP.6: 30 residues within 4Å: Chain C: I.150, S.151, P.152, F.153, N.154, L.159, K.177, P.178, P.179, T.180, G.208, R.209, G.210, G.214, D.215, V.218, F.228, T.229, G.230, S.231, I.234, E.250, L.251, G.252, C.284, E.377, F.379, L.405, R.437, F.444 16 PLIP interactions: 16 interactions with chain C Hydrophobic interactions: C:L.159, C:T.229 Hydrogen bonds: C:S.151, C:F.153, C:T.180, C:T.180, C:T.180, C:G.210, C:D.215, C:S.231, C:L.251, C:E.377, C:R.437 Water bridges: C:L.251, C:L.251 Salt bridges: C:K.177 NAP.9: 32 residues within 4Å: Chain D: I.150, S.151, P.152, F.153, N.154, L.159, K.177, P.178, P.179, T.180, G.208, R.209, G.210, G.214, D.215, V.218, F.228, T.229, G.230, S.231, I.234, R.237, E.250, L.251, G.252, G.253, C.284, E.377, F.379, L.405, R.437, F.444 15 PLIP interactions: 15 interactions with chain D Hydrophobic interactions: D:P.152, D:L.159, D:T.229 Hydrogen bonds: D:S.151, D:F.153, D:T.180, D:T.180, D:G.210, D:D.215, D:S.231, D:L.251, D:G.253, D:E.377, D:R.437 Salt bridges: D:K.177

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain B: R.103, R.283, T.285, Q.436, R.437, G.438 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:T.285, B:R.437 Salt bridges: B:R.103, B:R.283 SO4.3: 3 residues within 4Å: Chain B: D.327, T.328, K.329 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:T.328, B:K.329 SO4.5: 6 residues within 4Å: Chain C: R.103, R.283, T.285, Q.436, R.437, G.438 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:R.437 Salt bridges: C:R.103, C:R.283 SO4.7: 6 residues within 4Å: Chain D: R.103, R.283, T.285, Q.436, R.437, G.438 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:T.285, D:R.437 Salt bridges: D:R.103, D:R.283 SO4.8: 3 residues within 4Å: Chain D: D.327, T.328, K.329 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:T.328, D:T.328, D:K.329

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cobessi, D. et al., Apo and holo crystal structures of an NADP-dependent aldehyde dehydrogenase from Streptococcus mutans. J.Mol.Biol. (1999)

Release Date

1999-07-22

Peptides

NADP DEPENDENT NON PHOSPHORYLATING GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

NADP DEPENDENT NON PHOSPHORYLATING GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE

Related Entries With Identical Sequence