SMTL ID : 2ezv.1

Crystal structure of tetrameric restriction endonuclease SfiI bound to cognate DNA.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-tetramer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain C: D.79, D.100, A.101 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:D.79, C:D.100, C:A.101 CA.2: 3 residues within 4Å: Chain D: D.79, D.100, A.101 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:D.79, D:D.100, D:A.101 CA.3: 3 residues within 4Å: Chain G: D.79, D.100, A.101 3 PLIP interactions: 3 interactions with chain G Metal complexes: G:D.79, G:D.100, G:A.101 CA.4: 3 residues within 4Å: Chain H: D.79, D.100, A.101 3 PLIP interactions: 3 interactions with chain H Metal complexes: H:D.79, H:D.100, H:A.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vanamee, E.S. et al., A view of consecutive binding events from structures of tetrameric endonuclease SfiI bound to DNA. Embo J. (2005)

Release Date

2006-01-24

Peptides

Type II restriction enzyme SfiI: CDGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

D
B

G
A

H
B

Type II restriction enzyme SfiI

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