SMTL ID : 2f80.1 (1 other biounit)

HIV-1 Protease mutant D30N complexed with inhibitor TMC114

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-dimer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: G.73, T.74, N.88 Ligand excluded by PLIP CL.2: 1 residues within 4Å: Chain B: W.6 Ligand excluded by PLIP

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 2 residues within 4Å: Chain B: I.72, Q.92 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.92 Water bridges: B:T.74

1 x 017: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE(Non-covalent)

017.4: 20 residues within 4Å: Chain A: D.25, G.27, A.28, N.30, V.32, G.48, G.49, P.81, V.82, I.84 Chain B: D.25, G.27, A.28, D.29, N.30, G.48, G.49, I.50, V.82, I.84 21 PLIP interactions: 12 interactions with chain B, 9 interactions with chain A Hydrophobic interactions: B:I.50, B:V.82, B:I.84, A:A.28, A:V.32, A:P.81, A:V.82 Hydrogen bonds: B:D.25, B:G.27, B:G.27, B:D.29, B:N.30, B:N.30, A:N.30, A:N.30, A:I.50 Water bridges: B:I.50, B:I.50, A:N.30 Salt bridges: B:D.25, A:D.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kovalevsky, A.Y. et al., Effectiveness of Nonpeptide Clinical Inhibitor TMC-114 on HIV-1 Protease with Highly Drug Resistant Mutations D30N, I50V, and L90M. J.Med.Chem. (2006)

Release Date

2006-03-07

Peptides

POL POLYPROTEIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

POL POLYPROTEIN

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