SMTL ID : 2fko.1

Structure of PH1591 from Pyrococcus horikoshii OT3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-trimer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.65, H.87 Chain B: Q.59, H.82, Y.159 4 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: A:H.65, A:H.87, B:H.82, H2O.141 ZN.4: 5 residues within 4Å: Chain B: H.65, H.87 Chain C: Q.59, H.82, Y.159 4 PLIP interactions: 2 interactions with chain B, 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: B:H.65, B:H.87, C:H.82, H2O.330 ZN.7: 5 residues within 4Å: Chain A: Q.59, H.82, Y.159 Chain C: H.65, H.87 4 PLIP interactions: 2 interactions with chain C, 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: C:H.65, C:H.87, A:H.82, H2O.519

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: N.22, R.172 Chain C: E.21 Ligands: EDO.5, EDO.8 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.21, A:N.22, A:R.172 EDO.3: 4 residues within 4Å: Chain A: R.12, I.13, H.14, L.31 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.12 EDO.5: 5 residues within 4Å: Chain A: E.21 Chain B: N.22, R.172 Ligands: EDO.2, EDO.8 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.21, B:N.22, B:R.172 EDO.6: 4 residues within 4Å: Chain B: R.12, I.13, H.14, L.31 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.12 EDO.8: 5 residues within 4Å: Chain B: E.21 Chain C: N.22, R.172 Ligands: EDO.2, EDO.5 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:E.21, C:N.22, C:R.172 EDO.9: 4 residues within 4Å: Chain C: R.12, I.13, H.14, L.31 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:R.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jeyakanthan, J. et al., Observation of a calcium-binding site in the gamma-class carbonic anhydrase from Pyrococcus horikoshii. Acta Crystallogr.,Sect.D (2008)

Release Date

2007-01-16

Peptides

173aa long hypothetical ferripyochelin binding protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

173aa long hypothetical ferripyochelin binding protein

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