SMTL ID : 2fna.1 (1 other biounit)

Crystal structure of an archaeal aaa+ atpase (sso1545) from sulfolobus solfataricus p2 at 2.00 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: S.44 Ligands: ADP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:S.44, H2O.6, H2O.7, H2O.7, H2O.7

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 24 residues within 4Å: Chain A: L.3, D.5, T.6, S.7, P.8, K.9, D.14, F.15, F.16, L.38, R.39, R.40, T.41, G.42, K.43, S.44, S.45, F.209, F.217, P.243, G.244, T.247 Ligands: MG.1, EDO.5 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:S.7, A:S.7, A:K.9, A:K.9, A:F.16, A:F.16, A:R.40, A:T.41, A:G.42, A:K.43, A:S.44, A:S.45, A:S.45 Water bridges: A:S.44, A:S.44, A:E.145, A:S.178 Salt bridges: A:K.43 pi-Stacking: A:F.217

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 5 residues within 4Å: Chain A: P.57, Y.58, K.87, L.88, R.91 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.58, A:Y.58 EDO.4: 3 residues within 4Å: Chain A: Y.184, A.200, F.201 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.184, A:F.201, A:F.201 EDO.5: 5 residues within 4Å: Chain A: T.6, R.40, G.244, Y.269 Ligands: ADP.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.269 Water bridges: A:R.40 EDO.6: 5 residues within 4Å: Chain A: K.48, I.51, N.52, Y.58, Y.60 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.48, A:N.52 EDO.7: 6 residues within 4Å: Chain A: N.156, L.158, R.188, D.191, S.194, P.195 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.156, A:R.188, A:D.191 EDO.8: 5 residues within 4Å: Chain A: L.275, L.293, R.297, A.355, F.356 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.297, A:A.355

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, Q. et al., Crystal structure of a novel archaeal AAA+ ATPase SSO1545 from Sulfolobus solfataricus. Proteins (2009)

Release Date

2006-02-07

Peptides

Conserved hypothetical protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Conserved hypothetical protein

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