SMTL ID : 2fpp.1

Crystal structure of pig GTP-specific succinyl-CoA synthetase from polyethylene glycol with chloride ions

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

hetero-1-1-mer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: G.253, R.254, R.255 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.255 Salt bridges: A:R.254 SO4.3: 3 residues within 4Å: Chain B: G.52, G.53, R.54 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.53, B:R.54 Water bridges: B:R.54, B:G.55 Salt bridges: B:R.54 SO4.4: 3 residues within 4Å: Chain B: K.163, D.164, S.165 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.164, B:S.165 Salt bridges: B:K.163

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: G.21, T.45, T.46, P.47 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fraser, M.E. et al., Interactions of GTP with the ATP-grasp Domain of GTP-specific Succinyl-CoA Synthetase. J.Biol.Chem. (2006)

Release Date

2006-02-21

Peptides

Succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial: A
Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial

Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial

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