SMTL ID : 2g0t.1 (1 other biounit)

Crystal structure of a putative nucleotide binding protein (tm0796) from Thermotoga maritima at 2.67 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.67 Å

Oligo State

homo-dimer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 6 residues within 4Å: Chain A: C.179, V.180, V.181, G.182, K.183, R.184 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:V.180, A:V.181, A:G.182, A:K.183, A:R.184 Water bridges: A:G.182, A:K.183, A:R.184, A:R.184, A:T.185, A:Q.253 Salt bridges: A:K.183, A:R.184 PO4.4: 5 residues within 4Å: Chain B: V.180, V.181, G.182, K.183, R.184 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:V.180, B:V.181, B:G.182, B:K.183, B:R.184 Water bridges: B:K.183, B:T.185 Salt bridges: B:K.183, B:R.184

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: W.16, K.17, L.18, Q.20 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.20 Water bridges: A:W.16 EDO.3: 6 residues within 4Å: Chain A: R.184, G.207, Q.208, T.209, E.251, Q.253 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.40, A:R.184, A:T.209, A:T.209, A:E.251, A:Q.253 EDO.5: 5 residues within 4Å: Chain B: W.16, K.17, L.18, Y.19, Q.20 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:W.16

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.6: 5 residues within 4Å: Chain B: Q.189, E.192, R.193, E.196, L.340 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.189, B:Q.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of hypothetical protein (tm0796) from Thermotoga maritima at 2.67 A resolution. To be published

Release Date

2006-02-28

Peptides

conserved hypothetical protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

conserved hypothetical protein

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