SMTL ID : 2h5k.1

Crystal Structure of Complex Between the Domain-Swapped Dimeric Grb2 SH2 Domain and Shc-Derived Ligand, Ac-NH-pTyr-Val-Asn-NH2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.25 Å

Oligo State

homo-dimer

Ligands

1 x ACE- PTR- VAL- ASN- NH2: Shc-Derived Ligand(Non-covalent)

ACE-PTR-VAL-ASN-NH2.1: 12 residues within 4Å: Chain A: R.15, R.34, S.36, E.37, S.38, S.44, Q.54, H.55, F.56, K.57, L.68 Chain B: S.89 12 PLIP interactions: 11 interactions with chain A, 1 Ligand-Ligand interactions Hydrogen bonds: A:R.15, A:R.15, V.0, A:S.36, A:E.37, A:S.38, A:S.38, A:S.44 Hydrophobic interactions: A:H.55, A:K.57 Water bridges: A:S.36 Salt bridges: A:R.15, A:R.34 pi-Cation interactions: A:R.15

1 x CAC: CACODYLATE ION(Non-covalent)

CAC.2: 6 residues within 4Å: Chain B: R.15, R.34, S.36, E.37, S.38, S.44 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:R.34, B:R.34, B:S.36, B:E.37, B:S.38, B:S.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Benfield, A.P. et al., Structural and energetic aspects of Grb2-SH2 domain-swapping. Arch.Biochem.Biophys. (2007)

Release Date

2006-08-15

Peptides

Growth factor receptor-bound protein 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Growth factor receptor-bound protein 2

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