SMTL ID : 2hlh.1

Crystal structure of fucosyltransferase NodZ from Bradyrhizobium

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

4 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 6 residues within 4Å: Chain A: P.86, R.87, W.88, Q.103, R.106, E.110 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.87, A:W.88, A:Q.103, A:Q.103 Water bridges: A:R.91, A:R.91 Salt bridges: A:R.106 PO4.2: 4 residues within 4Å: Chain A: E.59, R.151, S.152, R.155 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.152, A:S.152, A:R.155 Water bridges: A:S.152, A:S.152, A:E.153 Salt bridges: A:R.151 PO4.3: 8 residues within 4Å: Chain A: G.14, F.15, G.16, D.17, R.177, S.287, A.288, F.289 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:G.14, A:G.16, A:D.17, A:S.287, A:F.289 Water bridges: A:G.14, A:G.14, A:R.177, A:R.177, A:A.288, A:A.288 Salt bridges: A:R.177 PO4.4: 6 residues within 4Å: Chain A: H.175, R.177, T.223, D.224, D.270, F.289 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.224, A:D.270 Salt bridges: A:H.175, A:R.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brzezinski, K. et al., High-resolution structure of NodZ fucosyltransferase involved in the biosynthesis of the nodulation factor. Acta Biochim.Pol. (2007)

Release Date

2007-07-17

Peptides

Nodulation fucosyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nodulation fucosyltransferase

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