SMTL ID : 2hvq.1

Structure of Adenylated full-length T4 RNA Ligase 2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: K.36, H.38, E.205 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:K.36, A:E.205, A:E.205, H2O.3, H2O.3 MG.2: 5 residues within 4Å: Chain A: I.163, K.164, L.165, N.167, Y.207 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:I.163, A:L.165, A:Y.207

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nandakumar, J. et al., RNA Ligase Structures Reveal the Basis for RNA Specificity and Conformational Changes that Drive Ligation Forward. Cell(Cambridge,Mass.) (2006)

Release Date

2006-10-17

Peptides

Hypothetical 37.6 kDa protein in Gp24-hoc intergenic region: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Hypothetical 37.6 kDa protein in Gp24-hoc intergenic region

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