SMTL ID : 2i66.1 (1 other biounit)

Structural Basis for the Mechanistic Understanding Human CD38 Controlled Multiple Catalysis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

2 x G1R: [(2R,3R,4R,5R)-5-(2-AMINO-6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL [(2R,3S,4R,5S)-3,4,5-TRIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE(Non-covalent)

G1R.1: 12 residues within 4Å: Chain A: L.86, W.87, S.88, R.89, L.107, E.108, S.155, S.182, T.183, F.184, E.188 Ligands: G1R.2 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:W.87, A:W.87, A:R.89, A:R.89, A:S.155, A:T.183, A:F.184 Water bridges: A:L.107 Salt bridges: A:R.89, A:R.89 G1R.2: 15 residues within 4Å: Chain A: W.87, L.107, E.108, D.117, W.138, V.147, S.148, W.151, K.152, S.155, D.181, T.183, S.186, V.187 Ligands: G1R.1 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:K.91, A:S.148, A:K.152, A:S.155, A:D.181, A:T.183, A:S.186 Water bridges: A:K.91, A:D.118, A:D.118, A:L.119, A:N.145, A:S.148, A:S.148, A:S.148, A:W.151, A:K.152 Salt bridges: A:E.108, A:D.117, A:K.152 pi-Stacking: A:W.151, A:W.151, A:W.151 pi-Cation interactions: A:W.151

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Q. et al., Structural basis for the mechanistic understanding of human CD38-controlled multiple catalysis. J.Biol.Chem. (2006)

Release Date

2006-09-05

Peptides

ADP-ribosyl cyclase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ADP-ribosyl cyclase 1

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