- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- hetero-oligomer
- Ligands
- 6 x ZN: ZINC ION(Non-covalent)
- 6 x 1IP: N~2~-(PHOSPHONOACETYL)-L-ASPARAGINE(Non-covalent)
1IP.3: 16 residues within 4Å:- Chain A: S.52, T.53, R.54, T.55, R.105, H.134, Q.137, R.167, T.168, R.229, Q.231, P.266, L.267, P.268
- Chain E: S.80, K.84
25 PLIP interactions:22 interactions with chain A, 3 interactions with chain E- Hydrophobic interactions: A:T.168, A:P.266
- Hydrogen bonds: A:A.51, A:S.52, A:T.53, A:R.54, A:T.55, A:T.55, A:R.105, A:R.105, A:R.229, A:R.229, A:Q.231, A:L.267, E:S.80, E:K.84
- Water bridges: A:R.54, A:R.167, A:R.234, A:R.234, A:R.234
- Salt bridges: A:R.105, A:H.134, A:R.167, E:K.84
1IP.5: 16 residues within 4Å:- Chain C: S.52, T.53, R.54, T.55, R.105, H.134, Q.137, R.167, T.168, R.229, Q.231, P.266, L.267
- Chain K: S.80, K.84
- Ligands: MAE.6
26 PLIP interactions:23 interactions with chain C, 3 interactions with chain K- Hydrophobic interactions: C:T.168, C:P.266
- Hydrogen bonds: C:S.52, C:T.53, C:T.53, C:T.53, C:R.54, C:R.54, C:T.55, C:R.105, C:R.105, C:R.229, C:R.229, C:Q.231, C:L.267, K:S.80, K:K.84
- Water bridges: C:R.167, C:T.168, C:R.229, C:R.234, C:R.234
- Salt bridges: C:R.105, C:H.134, C:R.167, K:K.84
1IP.11: 16 residues within 4Å:- Chain E: S.52, T.53, R.54, T.55, R.105, H.134, Q.137, R.167, T.168, R.229, Q.231, P.266, L.267, P.268
- Chain I: S.80, K.84
25 PLIP interactions:22 interactions with chain E, 3 interactions with chain I- Hydrophobic interactions: E:T.168, E:P.266
- Hydrogen bonds: E:A.51, E:S.52, E:T.53, E:R.54, E:T.55, E:T.55, E:R.105, E:R.105, E:R.229, E:R.229, E:Q.231, E:L.267, I:S.80, I:K.84
- Water bridges: E:R.54, E:R.167, E:R.234, E:R.234, E:R.234
- Salt bridges: E:R.105, E:H.134, E:R.167, I:K.84
1IP.13: 16 residues within 4Å:- Chain C: S.80, K.84
- Chain G: S.52, T.53, R.54, T.55, R.105, H.134, Q.137, R.167, T.168, R.229, Q.231, P.266, L.267
- Ligands: MAE.14
26 PLIP interactions:23 interactions with chain G, 3 interactions with chain C- Hydrophobic interactions: G:T.168, G:P.266
- Hydrogen bonds: G:S.52, G:T.53, G:T.53, G:T.53, G:R.54, G:R.54, G:T.55, G:R.105, G:R.105, G:R.229, G:R.229, G:Q.231, G:L.267, C:S.80, C:K.84
- Water bridges: G:R.167, G:T.168, G:R.229, G:R.234, G:R.234
- Salt bridges: G:R.105, G:H.134, G:R.167, C:K.84
1IP.19: 16 residues within 4Å:- Chain A: S.80, K.84
- Chain I: S.52, T.53, R.54, T.55, R.105, H.134, Q.137, R.167, T.168, R.229, Q.231, P.266, L.267, P.268
25 PLIP interactions:22 interactions with chain I, 3 interactions with chain A- Hydrophobic interactions: I:T.168, I:P.266
- Hydrogen bonds: I:A.51, I:S.52, I:T.53, I:R.54, I:T.55, I:T.55, I:R.105, I:R.105, I:R.229, I:R.229, I:Q.231, I:L.267, A:S.80, A:K.84
- Water bridges: I:R.54, I:R.167, I:R.234, I:R.234, I:R.234
- Salt bridges: I:R.105, I:H.134, I:R.167, A:K.84
1IP.21: 16 residues within 4Å:- Chain G: S.80, K.84
- Chain K: S.52, T.53, R.54, T.55, R.105, H.134, Q.137, R.167, T.168, R.229, Q.231, P.266, L.267
- Ligands: MAE.22
26 PLIP interactions:23 interactions with chain K, 3 interactions with chain G- Hydrophobic interactions: K:T.168, K:P.266
- Hydrogen bonds: K:S.52, K:T.53, K:T.53, K:T.53, K:R.54, K:R.54, K:T.55, K:R.105, K:R.105, K:R.229, K:R.229, K:Q.231, K:L.267, G:S.80, G:K.84
- Water bridges: K:R.167, K:T.168, K:R.229, K:R.234, K:R.234
- Salt bridges: K:R.105, K:H.134, K:R.167, G:K.84
- 6 x MAE: MALEIC ACID(Non-covalent)
MAE.4: 5 residues within 4Å:- Chain C: P.3, L.4, K.7, D.14, D.19
1 PLIP interactions:1 interactions with chain C- Salt bridges: C:K.7
MAE.6: 9 residues within 4Å:- Chain C: R.54, T.55, H.134, Q.137, L.140, P.266, A.289, R.296
- Ligands: 1IP.5
9 PLIP interactions:9 interactions with chain C- Hydrophobic interactions: C:R.54, C:L.140
- Hydrogen bonds: C:Q.137, C:Q.137, C:P.266
- Water bridges: C:A.289, C:A.289
- Salt bridges: C:H.134, C:R.296
MAE.12: 5 residues within 4Å:- Chain G: P.3, L.4, K.7, D.14, D.19
1 PLIP interactions:1 interactions with chain G- Salt bridges: G:K.7
MAE.14: 9 residues within 4Å:- Chain G: R.54, T.55, H.134, Q.137, L.140, P.266, A.289, R.296
- Ligands: 1IP.13
9 PLIP interactions:9 interactions with chain G- Hydrophobic interactions: G:R.54, G:L.140
- Hydrogen bonds: G:Q.137, G:Q.137, G:P.266
- Water bridges: G:A.289, G:A.289
- Salt bridges: G:H.134, G:R.296
MAE.20: 5 residues within 4Å:- Chain K: P.3, L.4, K.7, D.14, D.19
1 PLIP interactions:1 interactions with chain K- Salt bridges: K:K.7
MAE.22: 9 residues within 4Å:- Chain K: R.54, T.55, H.134, Q.137, L.140, P.266, A.289, R.296
- Ligands: 1IP.21
9 PLIP interactions:9 interactions with chain K- Hydrophobic interactions: K:R.54, K:L.140
- Hydrogen bonds: K:Q.137, K:Q.137, K:P.266
- Water bridges: K:A.289, K:A.289
- Salt bridges: K:H.134, K:R.296
- 6 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.7: 10 residues within 4Å:- Chain A: F.48, E.50, A.51, S.52, R.56, S.74
- Chain E: G.72, F.73, N.78, T.79
6 PLIP interactions:1 interactions with chain E, 5 interactions with chain A- Hydrophobic interactions: E:T.79, A:F.48
- Hydrogen bonds: A:S.52, A:S.52, A:R.56, A:S.74
MPD.8: 3 residues within 4Å:- Chain C: K.232, Y.240
- Chain I: P.237
4 PLIP interactions:3 interactions with chain C, 1 interactions with chain I- Hydrophobic interactions: C:K.232, C:Y.240, C:Y.240, I:P.237
MPD.15: 10 residues within 4Å:- Chain E: F.48, E.50, A.51, S.52, R.56, S.74
- Chain I: G.72, F.73, N.78, T.79
6 PLIP interactions:5 interactions with chain E, 1 interactions with chain I- Hydrophobic interactions: E:F.48, I:T.79
- Hydrogen bonds: E:S.52, E:S.52, E:R.56, E:S.74
MPD.16: 3 residues within 4Å:- Chain A: P.237
- Chain G: K.232, Y.240
4 PLIP interactions:1 interactions with chain A, 3 interactions with chain G- Hydrophobic interactions: A:P.237, G:K.232, G:Y.240, G:Y.240
MPD.23: 10 residues within 4Å:- Chain A: G.72, F.73, N.78, T.79
- Chain I: F.48, E.50, A.51, S.52, R.56, S.74
6 PLIP interactions:5 interactions with chain I, 1 interactions with chain A- Hydrophobic interactions: I:F.48, A:T.79
- Hydrogen bonds: I:S.52, I:S.52, I:R.56, I:S.74
MPD.24: 3 residues within 4Å:- Chain E: P.237
- Chain K: K.232, Y.240
4 PLIP interactions:1 interactions with chain E, 3 interactions with chain K- Hydrophobic interactions: E:P.237, K:K.232, K:Y.240, K:Y.240
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cardia, J.P. et al., Use of L-asparagine and N-phosphonacetyl-L-asparagine to investigate the linkage of catalysis and homotropic cooperativity in E. coli aspartate transcarbomoylase. Proteins (2008)
- Release Date
- 2007-08-28
- Peptides
- Aspartate carbamoyltransferase catalytic chain: ACEGIK
Aspartate carbamoyltransferase regulatory chain: BDFHJL - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CE
AG
CI
AK
CB
BD
DF
BH
DJ
BL
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- hetero-oligomer
- Ligands
- 6 x ZN: ZINC ION(Non-covalent)
- 6 x 1IP: N~2~-(PHOSPHONOACETYL)-L-ASPARAGINE(Non-covalent)
- 6 x MAE: MALEIC ACID(Non-covalent)
- 6 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cardia, J.P. et al., Use of L-asparagine and N-phosphonacetyl-L-asparagine to investigate the linkage of catalysis and homotropic cooperativity in E. coli aspartate transcarbomoylase. Proteins (2008)
- Release Date
- 2007-08-28
- Peptides
- Aspartate carbamoyltransferase catalytic chain: ACEGIK
Aspartate carbamoyltransferase regulatory chain: BDFHJL - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CE
AG
CI
AK
CB
BD
DF
BH
DJ
BL
D