SMTL ID : 2iq7.4 (6 other biounits)

Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: T.133, Y.137, G.164, Y.166, N.186 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Y.166

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.2: 6 residues within 4Å: Chain A: G.191, G.192, N.220, S.221, K.222, T.251 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.251 Water bridges: A:T.251

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bonivento, D. et al., Crystal structure of the endopolygalacturonase from the phytopathogenic fungus Colletotrichum lupini and its interaction with polygalacturonase-inhibiting proteins. Proteins (2008)

Release Date

2007-10-23

Peptides

endopolygalacturonase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

endopolygalacturonase

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