- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.10 Å
- Oligo State
- homo-trimer
- Ligands
- 1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 3 x PLM: PALMITIC ACID(Non-covalent)
PLM.4: 18 residues within 4Å:- Chain A: Q.264, A.266, G.282, I.283, A.284, G.300, I.301, T.302, V.319, T.320
- Chain B: D.260, V.278, A.279, Q.280, G.297, M.314, A.315, Q.316
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:Q.264, A:A.284, B:V.278, B:M.314
- Hydrogen bonds: A:Q.264
PLM.7: 16 residues within 4Å:- Chain B: Q.264, A.266, G.282, I.283, A.284, G.300, I.301, T.302, G.318, T.320, A.332
- Chain C: D.260, V.278, A.279, A.315, Q.316
10 PLIP interactions:5 interactions with chain C, 5 interactions with chain B- Hydrophobic interactions: C:A.279, C:A.315, C:Q.316, C:Q.316, B:Q.264, B:A.266, B:T.320, B:A.332
- Hydrogen bonds: C:D.260, B:Q.264
PLM.12: 16 residues within 4Å:- Chain A: D.260, V.278, A.279, I.294, I.312, M.313, M.314, A.315
- Chain C: Q.264, A.266, G.282, I.283, A.284, G.300, I.301, T.302
9 PLIP interactions:6 interactions with chain A, 3 interactions with chain C- Hydrophobic interactions: A:V.278, A:A.279, A:I.294, A:I.312, A:A.315, A:A.315, C:Q.264, C:T.302
- Hydrogen bonds: C:Q.264
- 2 x UD1: URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE(Non-covalent)
UD1.6: 13 residues within 4Å:- Chain A: H.267, Q.268, S.286, H.304
- Chain B: E.52, I.53, E.54, T.62, F.63, L.64, D.65, N.66, Y.69
15 PLIP interactions:11 interactions with chain B, 4 interactions with chain A- Hydrophobic interactions: B:N.66
- Hydrogen bonds: B:E.52, B:I.53, B:E.54, B:T.62, B:F.63, B:D.65, B:N.66, B:N.66, A:Q.268, A:S.286
- pi-Stacking: B:F.63, B:Y.69
- Salt bridges: A:H.304, A:H.304
UD1.11: 17 residues within 4Å:- Chain B: G.211, Y.212, F.248, H.267, Q.268, G.285, S.286, G.303, H.304
- Chain C: E.52, I.53, E.54, T.62, F.63, L.64, D.65, Y.69
17 PLIP interactions:7 interactions with chain B, 10 interactions with chain C- Hydrogen bonds: B:Y.212, B:H.267, B:Q.268, B:S.286, B:H.304, C:E.52, C:I.53, C:E.54, C:T.62, C:F.63, C:D.65, C:Y.69, C:Y.69
- Salt bridges: B:H.304, B:H.304
- Hydrophobic interactions: C:Y.69
- pi-Stacking: C:F.63
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Buetow, L. et al., Structure and Reactivity of Lpxd, the N-Acyltransferase of Lipid a Biosynthesis. Proc.Natl.Acad.Sci.USA (2007)
- Release Date
- 2007-02-20
- Peptides
- UDP-3-O-[3-HYDROXYMYRISTOYL] GLUCOSAMINE N-ACYLTRANSFERASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.10 Å
- Oligo State
- homo-trimer
- Ligands
- 1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 3 x PLM: PALMITIC ACID(Non-covalent)
- 2 x UD1: URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Buetow, L. et al., Structure and Reactivity of Lpxd, the N-Acyltransferase of Lipid a Biosynthesis. Proc.Natl.Acad.Sci.USA (2007)
- Release Date
- 2007-02-20
- Peptides
- UDP-3-O-[3-HYDROXYMYRISTOYL] GLUCOSAMINE N-ACYLTRANSFERASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C