SMTL ID : 2ivn.1

STRUCTURE OF UP1 PROTEIN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: V.145, F.146, E.148, D.196 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.148, A:D.196 Water bridges: A:E.148, A:E.148

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.2: 24 residues within 4Å: Chain A: T.9, A.10, H.107, H.111, Y.127, S.129, G.130, G.131, N.132, G.155, D.159, P.170, G.171, G.172, P.173, E.176, G.253, V.254, A.256, N.257, Y.280, R.284, D.285 Ligands: MG.3 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:T.9, A:T.9, A:S.129, A:S.129, A:G.130, A:G.131, A:N.132, A:N.132, A:D.159, A:G.171, A:G.172, A:E.176, A:G.253, A:N.257, A:D.285, A:D.285 Water bridges: A:Y.280, A:R.284, A:D.285, A:D.285

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 8 residues within 4Å: Chain A: H.111, S.129, G.252, G.253, C.283, R.284, D.285 Ligands: ANP.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.285

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hecker, A. et al., An Archaeal Orthologue of the Universal Protein Kae1 is an Iron Metalloprotein which Exhibits Atypical DNA-Binding Properties and Apurinic-Endonuclease Activity in Vitro. Nucleic Acids Res. (2007)

Release Date

2007-07-31

Peptides

O-SIALOGLYCOPROTEIN ENDOPEPTIDASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

O-SIALOGLYCOPROTEIN ENDOPEPTIDASE

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