SMTL ID : 2iyl.1

Structure of an FtsY:GDP complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 16 residues within 4Å: Chain A: N.91, G.92, V.93, G.94, K.95, T.96, T.97, K.101, T.235, K.236, D.238, G.261, V.262, G.263, E.264 Ligands: SO4.3 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:G.92, A:V.93, A:G.94, A:K.95, A:T.96, A:T.96, A:T.96, A:T.97, A:T.97, A:K.101, A:K.236, A:K.236, A:G.263 Water bridges: A:K.95 Salt bridges: A:K.95, A:D.238, A:E.264

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: R.163, Y.165 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.165, A:Y.165 Salt bridges: A:R.163 SO4.3: 7 residues within 4Å: Chain A: N.91, G.92, V.93, G.94, K.95, T.96 Ligands: GDP.1 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:N.91, A:G.92, A:V.93, A:G.94, A:K.95, A:T.96, A:T.96 Water bridges: A:K.95, A:D.119 Salt bridges: A:K.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gawronski-Salerno, J. et al., X-ray structure of the T. aquaticus FtsY:GDP complex suggests functional roles for the C-terminal helix of the SRP GTPases. Proteins (2007)

Release Date

2007-01-02

Peptides

CELL DIVISION PROTEIN FTSY: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

CELL DIVISION PROTEIN FTSY

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