SMTL ID : 2j7b.2 (1 other biounit)

Beta-glucosidase from Thermotoga maritima in complex with gluco- tetrazole

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.87 Å

Oligo State

monomer

Ligands

1 x NTZ: NOJIRIMYCINE TETRAZOLE(Non-covalent)

NTZ.1: 13 residues within 4Å: Chain A: Q.42, H.143, W.144, N.187, E.188, N.315, Y.317, W.346, E.373, W.420, E.427, W.428, F.436 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.42, A:Q.42, A:H.143, A:N.187, A:E.188, A:N.315 Water bridges: A:N.425

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 4 residues within 4Å: Chain A: L.198, Y.199, F.267, F.289 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.199 Hydrogen bonds: A:Y.199

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 3 residues within 4Å: Chain A: D.300, S.303, E.304 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.300, A:E.304, A:E.304, H2O.9, H2O.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gloster, T.M. et al., Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics. J.Am.Chem.Soc. (2007)

Release Date

2006-10-18

Peptides

BETA-GLUCOSIDASE A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

BETA-GLUCOSIDASE A

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