SMTL ID : 2j9b.1

THE CRYSTAL STRUCTURE OF CYTOCHROME C' FROM RUBRIVIVAX GELATINOSUS AT 1.5 A RESOLUTION AND PH 6.3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x HEC: HEME C(Covalent)

HEC.1: 23 residues within 4Å: Chain A: I.9, R.12, Q.13, F.16, T.17, I.19, A.20, L.56, F.59, T.69, E.70, A.71, F.82, A.85, A.86, F.89, T.115, A.118, C.119, C.122, H.123, F.126, K.127 21 PLIP interactions: 21 interactions with chain A, Hydrophobic interactions: A:F.16, A:F.16, A:F.16, A:F.16, A:I.19, A:L.56, A:F.59, A:F.82, A:A.85, A:F.89, A:F.89, A:T.115, A:K.127, A:K.127 Hydrogen bonds: A:Q.13, A:Q.13, A:T.17, A:E.70, A:A.71 Salt bridges: A:R.12 Metal complexes: A:H.123 HEC.2: 21 residues within 4Å: Chain B: R.12, Q.13, F.16, T.17, I.19, A.20, L.56, F.59, T.69, E.70, A.71, F.82, A.85, A.86, F.89, A.118, C.119, C.122, H.123, F.126, K.127 19 PLIP interactions: 19 interactions with chain B, Hydrophobic interactions: B:F.16, B:F.16, B:F.16, B:F.16, B:I.19, B:L.56, B:F.59, B:F.82, B:A.85, B:F.89, B:F.89 Hydrogen bonds: B:Q.13, B:Q.13, B:T.69, B:E.70, B:A.71 Water bridges: B:T.17 Salt bridges: B:R.12 Metal complexes: B:H.123

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Benini, S. et al., High resolution crystal structure of Rubrivivax gelatinosus cytochrome c'. J. Inorg. Biochem. (2008)

Release Date

2007-12-04

Peptides

CYTOCHROME C': AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CYTOCHROME C'

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